1.A master of science in genetic counseling program in the Philippines
Laurino Mercy Y. ; David-Padilla Carmencita ; Alcausin Maria Melanie B. ; Silao Catherine Lynn T. ; Cutiongco-de la Paz Eva Maria
Acta Medica Philippina 2011;45(4):7-9
In the Philippines, there is an urgent need to expand the clinical services for diagnosis, management and emotional support for patients with genetic conditions and their family members. Despite the lack of trained providers with specialization in genetics, public health related geneticsprograms are continuously being implemented. These address these current demands,strategic planning began in 2009 between local medical geneticists and international genetic professionals to develop the curriculum for an advanced degree in genetic counseling program. The board of regents at the University of the Philippines approved the proposed curriculum in January 2011, and training of the Philippines first cohort of genetic counseling students commenced in June 2011. The successful implementation of the MS of Genetic Counseling program will provide the opportunity to incorporate the match needed genetic counseling services in the country.
Human
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Male
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Female
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GENETIC COUNSELING
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GENETIC SERVICES
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HEALTH SERVICES
2.Inbreeding Coefficients in Two Isolated Mongolian Populations: GENDISCAN Study.
Joohon SUNG ; Mi Kyeong LEE ; Jeong Sun SEO
Genomics & Informatics 2008;6(1):14-17
GENDISCAN study (Gene Discovery for Complex traits in Asian population of Northeast area) was designed to incorporate methodologies which enhance the power to identify genetic variations underlying complex disorders. Use of population isolates as the target population is a unique feather of this study. However, population isolates may have hidden inbreeding structures which can affect the validity of the study. To understand how this issue may affect results of GENDISCAN, we estimated inbreeding coefficients in two study populations in Mongolia. We analyzed the status of Hardy-Weinberg Equilibrium (HWE), polymorphism information contents (PIC), heterozygosity, allelic diversity, and inbreeding coefficients, using 317 and 1,044 STR (short tandem repeat) markers in Orkhontuul and Dashbalbar populations. HWE assumptions were generally met in most markers (88.6% and 94.2% respectively), and single marker PIC ranged between 0.2 and 0.9. Inbreeding coefficients were estimated to be 0.0023 and 0.0021, which are small enough to assure that conventional genetic analysis would work without any specific modification. We concluded that the population isolates used in GENDISCAN study would not present significant inflation of type I errors from inbreeding effects in its gene discovery analysis.
Animals
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Asian Continental Ancestry Group
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Feathers
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Genetic Association Studies
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Genetic Variation
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Health Services Needs and Demand
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Humans
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Inbreeding
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Inflation, Economic
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Mongolia
3.Inbreeding Coefficients in Two Isolated Mongolian Populations: GENDISCAN Study.
Joohon SUNG ; Mi Kyeong LEE ; Jeong Sun SEO
Genomics & Informatics 2008;6(1):14-17
GENDISCAN study (Gene Discovery for Complex traits in Asian population of Northeast area) was designed to incorporate methodologies which enhance the power to identify genetic variations underlying complex disorders. Use of population isolates as the target population is a unique feather of this study. However, population isolates may have hidden inbreeding structures which can affect the validity of the study. To understand how this issue may affect results of GENDISCAN, we estimated inbreeding coefficients in two study populations in Mongolia. We analyzed the status of Hardy-Weinberg Equilibrium (HWE), polymorphism information contents (PIC), heterozygosity, allelic diversity, and inbreeding coefficients, using 317 and 1,044 STR (short tandem repeat) markers in Orkhontuul and Dashbalbar populations. HWE assumptions were generally met in most markers (88.6% and 94.2% respectively), and single marker PIC ranged between 0.2 and 0.9. Inbreeding coefficients were estimated to be 0.0023 and 0.0021, which are small enough to assure that conventional genetic analysis would work without any specific modification. We concluded that the population isolates used in GENDISCAN study would not present significant inflation of type I errors from inbreeding effects in its gene discovery analysis.
Animals
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Asian Continental Ancestry Group
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Feathers
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Genetic Association Studies
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Genetic Variation
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Health Services Needs and Demand
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Humans
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Inbreeding
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Inflation, Economic
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Mongolia
4.Challenge of Personalized Medicine in the Genomic Era.
Journal of Genetic Medicine 2008;5(2):89-93
"Personalized medicine," the goal of which is to provide better clinical care by applying patient's own genomic information to their health care is a global challenge for the 21st century "genomic era." This is especially true in Korea, where provisions for clinical genetic services are inadequate for the existing demand, let alone future demands. Genomics-based knowledge and tools make it possible to approach each patient as a unique biological individual, which has led to a paradigm-shift in medical practice, giving it more of a predictive focus as compared with current treatment oriented approach. With recent advancements in genomics, many genetic tests, such as susceptibility genetic tests, have been developed for both rare single gene diseases and more common multifactorial diseases. Indeed, genetic tests for presymtomatic individuals and genetic tests for drug response have become widely available, and personalized medicine will face the challenge of assisting patients who use such tests to make appropriate and wise use of genetic risk assessment. A major challenge of genomic medicine lies in understanding and communicating disease risk in order to facilitate and support patients and their families in making informed decisions. Establishment of a health care system with provisions for genetic counseling as an integral part of health care service, in addition to genomic literacy of health care providers, is vital to meet this growing challenge. Realization of the promise of personalized medicine in the era of genomics for improvement of health care is dependent on further development of next generation sequencing technology and affordable sequencing test costs. Also necessary will be policy development concerning the ethical, legal and social issues of genomic medicine and an educated and ready medical community with clinical practice guidelines for genetic counseling and genetic testing.
Delivery of Health Care
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Genetic Counseling
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Genetic Services
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Genetic Testing
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Genomics
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Health Personnel
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Humans
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Precision Medicine
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Korea
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Linear Energy Transfer
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Policy Making
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Risk Assessment
5.Communication Patterns in Korean Families during BRCA Genetic Testing for Breast Cancer.
Gwen ANDERSON ; Myunghee JUN ; Kyung Sook CHOI
Journal of Korean Oncology Nursing 2011;11(3):200-209
PURPOSE: The purpose of this micro-ethnography is to examine whether science and societal changes impact family communication patterns among a convenience sample of 16 Korean women. METHODS: The authors observed family communication in the context of a new breast cancer genetic screening and diagnostic testing program to detect BRCA gene mutations in Korean women at highest risk. RESULTS: Analysis of in-depth interviews and field notes taken during participant observation illustrated that communication patterns in families vary according to a woman's position in the family. If a grandmother tests positive for a gene mutation, her daughters make decisions on her behalf; they open and maintain the communication channel among family members. If a housewife is diagnosed with cancer and a genetic mutation, she immediately consults her husband and her sisters. The husband creates an open communication channel between his wife, his parents and his siblings. As a result, a woman's cancer is a concern for the whole family not merely a woman's secret or crisis. CONCLUSION: Cultural differences are important to consider when designing new genetic service programs in different countries.
Anthropology, Cultural
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Breast
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Breast Neoplasms
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Diagnostic Tests, Routine
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Female
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Genes, vif
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Genetic Counseling
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Genetic Services
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Genetic Testing
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Health Communication
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Humans
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Nuclear Family
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Parents
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Siblings
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Spouses
6.CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis.
Chul Hyun CHO ; Heon Jeong LEE ; Hyun Goo WOO ; Ji Hye CHOI ; Tiffany A GREENWOOD ; John R KELSOE
Psychiatry Investigation 2015;12(3):402-407
Although bipolar disorder is highly heritable, the identification of specific genetic variations is limited because of the complex traits underlying the disorder. We performed a genome-wide association study of bipolar disorder using a subphenotype that shows hypersomnia symptom during a major depressive episode. We investigated a total of 2,191 cases, 1,434 controls, and 703,012 single nucleotide polymorphisms (SNPs) in the merged samples obtained from the Translational Genomics Institute and the Genetic Association Information Network. The gene emerging as the most significant by statistical analysis was rs1553441 (odds ratio=0.4093; p=1.20x10-5; Permuted p=6.0x10-6). However, the 5x0-8 threshold for statistical significance required in a genome-wide association study was not achieved. The functional enrichment pathway analysis showed significant enrichments in the adhesion, development-related, synaptic transmission-related, and cell recognition-related pathways. For further evaluation, each gene of the enriched pathways was reviewed and matched with genes that were suggested to be associated with psychiatric disorders by previous genetic studies. We found that the cadherin 13 and hypocretin (orexin) receptor 2 genes may be involved in the hypersomnia symptom during a major depressive episode of bipolar disorder.
Bipolar Disorder*
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Disorders of Excessive Somnolence*
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Genetic Variation
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Genome-Wide Association Study
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Genomics
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Information Services
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Polymorphism, Single Nucleotide
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Orexins
7.Current Issues and Tasks of Genetic Cancer Nursing in Korea.
Myunghee JUN ; Kyung Sook CHOI ; Gyeyoung SHIN
Asian Oncology Nursing 2012;12(4):267-273
PURPOSE: The purpose of this review article is to introduce how the Korean Society of Genetic Nursing (KSGN) has evolved and tried to translate genomic knowledge to nursing practice, and then to suggest the future role of genetic nurses in Korea. METHODS: A literature review was performed and the current status of genetic counselling in Korea was explored. Then the educational and clinical experiences of the authors were incorporated. Finally, the main activities of Korean nursing for genetics were identified. RESULTS: Two types of genetic counsellor certification have been issued in Korea: one is issued by the Korean Society of Genetic Medicine, another by the Korean Society of Breast Cancer since June 2011. A few Korean nursing researchers have continuously performed research related to genetic nursing and undertook several research projects funded by the government since 2003. In February 2011, KSGN was established and is now trying to establish further international networks. CONCLUSION: Nursing genetic experts should be trained to integrate all specialties for genetic counselling, so they can provide holistic genetic services including ethical, legal, and social issues (ELSI).
Breast Neoplasms
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Certification
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Financial Management
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Genetic Counseling
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Genetic Services
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Genetics
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Genomics
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History of Nursing
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Korea
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Nursing
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Nursing Research
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Oncology Nursing*
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Professional Role
8.CAG Repeat Expansions in the Patients with Mood Disorder.
Sung En SOHN ; Shinn Won LIM ; Soh Young LEE ; Hye Zin HWANG ; Dong Kyu JIN ; Jeung Euy PARK ; Doh Kwan KIM ; Eyoung KIM
Journal of Korean Neuropsychiatric Association 2000;39(2):373-380
OBJECTIVES: The genetic facotrs have been suggested for the etiology of mood disorders but the mode of inheritance is complex. Increased severity and an earlier onset of the bipolar and major depressive disorder over generations within families(Anticipation) were reported. In order to test the hypothesis that trinucleotide repeat expansions underlie the genetic basis of Bipolar and major depressive disorders, we have analyzed the extent of CAG reapeats in genomic DNA from mood disorder patients. METHODS: 55 bipolar disorder, 67 major depressive disorder patients were recruited according to the DSM-III-R criteria. 89 normal controls were recruited from the medical personnel, students and the visitors to the health services center who had no history of psychiatric illness and show normal profile of MMPI. The genomic DNA of patients and controls was analyzed by use of the(CTG) 17 oligonucleotide and the repeat expansion detection(RED) method. The Mann-Whitney U test was used to compare the distribution of the number of CAG repeats among the groups. RESULTS: when the bipolar disorder, major depressive disorder patients were compared with the control group, no significant differences were observed. CONCLUSION: Our results do not support the hypothesis that expanding CAG repeats are causing the observed genetic anticipation in bipolar disorders and major depressive disorders.
Anticipation, Genetic
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Bipolar Disorder
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Depressive Disorder, Major
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DNA
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Family Characteristics
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Health Services
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Humans
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MMPI
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Mood Disorders*
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Trinucleotide Repeat Expansion
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Trinucleotide Repeats
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Wills
9.Population intervention of thalassemia relying on family planning service system.
Shan-wei FENG ; Jun-mei GU ; Hua LI ; Gui-tian HUANG ; Dong-mu ZHANG ; Gui-lan CHEN ; Yan-xia QU ; Ying TANG ; Fan JIANG ; Linguo TANG ; Weixiong WU
Chinese Journal of Medical Genetics 2011;28(2):223-226
OBJECTIVETo set up thalassemia population intervention model in order to decrease the birth of thalassemia major, relying on population and family planning service system.
METHODSPregnant women and their husbands were educated about thalassemia, and participated in screening and prenatal diagnosis if the couple were carriers of thalassemia in the areas of Huangpu, Panyu, Zengcheng and Tianhe districts of Guangzhou.
RESULTSThe network of thalassemia intervention mainly dependent on family planning service system was set up in these regions. A total of 10 695 families participated in thalassemia screening and 16 thalassemia major fetuses were diagnosed in the last two years. No one was thalassemia major in the 8360 newborn.
CONCLUSIONThalassemia population intervention model was set up relying on family planning service system and it significantly decreased the birth of thalassemia major.
Family Planning Services ; methods ; Female ; Genetic Counseling ; Heterozygote ; Humans ; Infant, Newborn ; Male ; Mass Screening ; methods ; Pregnancy ; Prenatal Diagnosis ; methods ; Spouses ; Thalassemia ; diagnosis ; genetics ; prevention & control
10.Clinical Pharmacogenetic Testing and Application: Laboratory Medicine Clinical Practice Guidelines Part 2.
Sollip KIM ; Yeo Min YUN ; In Suk KIM ; Sang Hoon SONG ; Hye In WOO ; Kyung A LEE ; Woochang LEE ; Hyun Jung CHO ; Misuk JI ; Hyo Jin CHAE ; Soo Youn LEE ; Sail CHUN
Laboratory Medicine Online 2016;6(4):193-213
Pharmacogenetics is a rapidly evolving field and the number of pharmacogenetic tests for clinical use is steadily increasing. However, incorrect or inadequate implementation of pharmacogenetic tests in clinical practice may result in a rise in medical costs and adverse outcomes in patients. This document suggests guidelines for the clinical application, interpretation, and reporting of pharmacogenetic test results based on a literature review and the collection of evidence-based expert opinions. The clinical laboratory practice guidelines encompass the clinical pharmacogenetic tests covered by public medical insurance in Korea. Technical, ethical, and regulatory issues related to clinical pharmacogenetic tests have also been addressed. In particular, this document comprises the following pharmacogenetic tests: CYP2C9 and VKORC1 for warfarin, CYP2C19 for clopidogrel, CYP2D6 for tricyclic antidepressants, codeine, tamoxifen, and atomoxetine, NAT2 for isoniazid, UGT1A1 for irinotecan, TPMT for thiopurines, EGFR for tyrosine kinase inhibitors, ERBB2 (HER2) for erb-b2 receptor tyrosine kinase 2-targeted therapy, and KRAS for anti-epidermal growth factor receptor drugs. These guidelines would help improve the usefulness of pharmacogenetic tests in routine clinical settings.
Antidepressive Agents, Tricyclic
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Atomoxetine Hydrochloride
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Clinical Laboratory Services
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Codeine
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Cytochrome P-450 CYP2C19
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Cytochrome P-450 CYP2C9
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Cytochrome P-450 CYP2D6
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Expert Testimony
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Genetic Testing
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Humans
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Insurance
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Isoniazid
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Korea
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Pharmacogenetics
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Protein-Tyrosine Kinases
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Tamoxifen
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Warfarin