1.The implication of amino acid mutations at flavivirus NS1-2A cleavage site on NS1’protein production
Siti Nor Khadijah Addis ; Jayaram Bettadapura
Malaysian Journal of Microbiology 2015;11(4):398-402
Aims: The presence of a C-terminally extended form of NS1 (NS1’ protein) has been previously reported in encephalitic
flaviviruses, due to the presence of -1 programmed ribosomal frameshift at the N-terminal of NS2A protein. This present
study is aimed to further confirm that the NS1’ protein production is independent of the authentic cleavage at NS1-2A
junction.
Methodology and results: Six different constructs (P1-Leu, P2-Asp, P3-Phe, P3-Leu, P3-Gly and P5-8 Ala) containing
various mutations at conserved and variable amino acids at C-terminal of NS1 protein were generated by site-directed
mutagenesis and analysed with transient polyprotein expression assay. While analysis on the NS1-2A cleavage of the
mutants exhibited extremely poor to efficient cleavage ranging from 6-89%, significant amount of NS1’ being expressed
in all mutants irrespective of their NS1-2A cleavage outcome.
Conclusion, significance and impact study: In this analysis, we showed for the first time that the abolishment of the
authentic NS1-2A cleavage in Murray Valley encephalitis virus (MVEV) did not impact on NS1’ production. This
observation extend on previous studies to show that NS1 and NS2A proteins are the product of NS1-2A cleavage which
is catalysed by an unknown host protease while NS1’ protein is a product of ribosomal frameshift, independent of the
authentic cleavage at NS1-2A junction.
Flavivirus
2.Potential Therapeutics Against Flaviviruses.
Pyung Ok LIM ; Tae Hee LEE ; Kyung Min CHUNG
Journal of Bacteriology and Virology 2012;42(2):108-120
Flaviviruses have been important human pathogens after emerging and resurging flavivirus diseases over the past decades. Although effective therapeutic agents are not yet commercially available for use in humans, significant progress has been made toward developing effective therapeutics and treatments. Several studies have shown that antibodies against the flaviviral E and NS1 proteins play a central role in prophylaxis and/or treatment of flavivirus infection through passive immunization. In addition, many anti-flavivirals, including interferons, oligonucleotide-based platforms, and small compounds, have been developed and evaluated for their antiviral effects. This review provides an overview of various approaches to the development of anti-flaviviral candidates and new insights that could improve our strategies for designing effective therapeutics against flaviviruses.
Antibodies
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Flavivirus
;
Flavivirus Infections
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Humans
;
Immunization, Passive
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Interferons
;
Proteins
3.The study on vertical transmision of Nam Dinh Virus and Coltivirus group B from Culex quinque fasciatus in Can Tho Province
Nga Thi Thanh Phan ; Loan Thi Kim Huynh ; Trang Minh Bui ; Quyen Do Pham ; Hoang Viet Nguyen ; Hien Thi Thu Le ; Thu Thi Viet Ho ; Thao Phuong Huynh ; Huong Thi Que Vu
Journal of Preventive Medicine 2007;17(3):11-15
Background:\r\n', u'There are two virus known as Nam Dinh Virus, and Colti group B be found in Viet Nam. These viruses have appeared in the South, the Middle and the Highland. They haven\u2019t been reported in the Southern provinces and Can Thoas well. \r\n', u'Objectives: \r\n', u'To identify the circulation of Nam Dinh virus strain, and coltivirus group B strain in Can Tho, Southern Viet Nam, and their existence in nature.\r\n', u'Subjects and method: \r\n', u'Thirty-four mosquito samples (7, 453 individual mosquitoes) from Culex quinque faciatus and Culex pseudovishnui were collected in Can Tho provice, southern Vietnam 2005.\r\n', u'Isolatingviruses on Aedes albopictuc clone C6/36, Vero cells, and using PT- PCR and ELISA Sandwich for identification. \r\n', u'Results:\r\n', u'2 Nam Dinh virus strains, 2 coltivirus group B strains and 1 flavivirus strain (insect flavivirus) were isolated from Culex quinque faciatus, and no virus was isolated from Culex pseudovishnui.\r\n', u'Conclusion: \r\n', u'The identification of the transmission of Nam dinh Virus, and coltivirus group B in Can Tho province by isolating virus from Culex quinque faciatus has shown the evidence for natural vertical transmission of these viruses.\r\n', u'
Viruses
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Coltivirus
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Flavivirus
;
Arboviruses
;
Culex
;
4.Flavivirus-infected hosts attract more mosquitoes to bite.
Hong ZHANG ; Xi YU ; Yibin ZHU ; Gong CHENG
Frontiers of Medicine 2023;17(2):355-357
Humans
;
Animals
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Culicidae
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Flavivirus
;
Cell Line
;
Spiramycin
5.Value of CODEHOP RT-pCR in detection of Flavivirus.
Qun HU ; Jian-Ning ZHEN ; Si-Jie MA ; Hui HAN ; Xiao-Hong SUN
Chinese Journal of Virology 2014;30(2):171-176
This study aims to analyse the value of CODEHOP RT-PCR in the detection of Flavivirus. According to the amino acid sequences of polyproteins of different flaviviruses published in GenBank, a pair of primers was designed using the CODEHOP method. One-step RT-PCR was used to detect Japanese encephalitis virus strain JEV1201, Dengue virus strain JKD001, and yellow fever virus vaccine YV6161. BLAST analysis and phylogenetic analysis were performed after the RT-PCR products of nucleocapsid genes were sequenced. The results showed that this method could amplify Flavivirus specifically, and the size and sequence of the target fragment accorded with the anticipated result. JEV1201 had the highest homology to Japanese encephalitis virus strain YL2009-4/YC2009-3, belonging to the branch of the phylogenetic tree of Japanese encephalitis virus strains. JKD001 had the highest homology to Dengue virus strain DENV-2/ID/1022DN/1975, belonging to the branch of the phylogenetic tree of Dengue virus strains. YV6161 had the highest homology to Yellow fever virus strain 17D, belonging to the branch of the phylogenetic tree of Yellow fever virus strains. In conclusion, the method of CODEHOP RT-PCR can be effectively used to detect, identify, and phylogenetically analyse Flavivirus.
DNA Primers
;
genetics
;
Flavivirus
;
classification
;
genetics
;
isolation & purification
;
Flavivirus Infections
;
virology
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Reverse Transcriptase Polymerase Chain Reaction
;
methods
;
Viral Nonstructural Proteins
;
genetics
6.Three cases of dengue fever among the medical relief team serving in the tsunami region.
Seung Hee LEE ; Jae Il LEE ; Chang Ki MOON ; Seong O SUH ; Eun Sil KIM ; Jun Oh JUNG ; Nam Joong KIM
Korean Journal of Medicine 2006;71(3):333-337
Dengue fever, which is caused by a mosquito-borne flavivirus, has become a major infectious- disease threat in tropical and subtropical areas. Dengue fever has also become a common cause of febrile infections in persons who have recently traveled. On December 26, 2004 the tsunami hit Southeast Asia. People who survived in those areas were infected with endemic disease such as dengue fever, malaria and cholera. We sent six members of the Korean medical relief team to the tsunami region. Three workers developed fever, chills and headache after leaving the tsunami region, and were diagnosed with Dengue fever. Such an outbreak of Dengue Fever in travelers is rarely reported.
Asia, Southeastern
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Chills
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Cholera
;
Dengue*
;
Disease Outbreaks
;
Endemic Diseases
;
Fever
;
Flavivirus
;
Headache
;
Humans
;
Malaria
;
Tsunamis*
7.Eight Cases of Dengue Fever in a Volunteer Group from Sri Lanka and Its Ocular Involvement.
Ji Yeon LEE ; Hyun Ah KIM ; Yu Cheol KIM ; Seong Yeol RYU
Korean Journal of Medicine 2017;92(5):484-487
Dengue fever is an acute febrile disease that is caused by a mosquito-borne flavivirus. It has become a major infectious disease threat in tropical and subtropical areas. In Korea, travel-associated dengue fever is increasing. Thirty-five Koreans went to Sri Lanka to do volunteer activities. Eight of the volunteers developed fever, myalgia, and rash; they were diagnosed with dengue fever. Two patients had macular hemorrhages and edema with no ophthalmic symptoms. The maculopathy caused by the dengue fever improved without specific treatment.
Communicable Diseases
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Dengue*
;
Edema
;
Exanthema
;
Eye Manifestations
;
Fever
;
Flavivirus
;
Hemorrhage
;
Humans
;
Korea
;
Myalgia
;
Sri Lanka*
;
Volunteers*
8.Real-time RT-PCR Assay for the Detection of Culex flavivirus.
Yu Xi CAO ; Xiao Xia HE ; Shi Hong FU ; Ying HE ; Hao LI ; Xiao Yan GAO ; Guo Dong LIANG ; Huan Yu WANG ;
Biomedical and Environmental Sciences 2015;28(12):917-919
9.Outbreak of Zika Virus.
Jong Jin WOO ; Jeong Hoon BAE ; Ji Hoon KANG ; Keun Hwa LEE
Journal of Bacteriology and Virology 2016;46(4):330-334
Zika virus (ZIKV) is a vector-borne flavivirus. It was initially identified in Uganda in 1947, and the first human infection was reported in Nigeria in 1953. Since 2015, ZIKV has been spreading rapidly in Brazil and the Americas. Given its general symptoms, ZIKV is considered to be a mild, febrile illness, although it is associated with severe neurologic complications. On February 1, 2016, the World Health Organization (WHO) declared a Public Health Emergency of International Concern (PHEIC). We conducted a review of the literature on the epidemiology and transmission, clinical manifestations, and diagnosis of ZIKV. Additionally, we introduce original literature on the current ZIKV outbreak in this review.
Americas
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Brazil
;
Diagnosis
;
Emergencies
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Epidemiology
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Flavivirus
;
Humans
;
Nigeria
;
Public Health
;
Uganda
;
World Health Organization
;
Zika Virus*