1.Detection for respiratory viruses in children with multiplex PCR
Lie HUANG ; Fansheng ZENG ; Qiong WANG ; Runxiang WU ; Xiaofang LUO ; Xuedong LU
Chinese Journal of Microbiology and Immunology 2009;29(7):664-667
Objective To characterize the prevalence and occurrence of respiratory viruses in chil-dren in Southern China. Methods Respiratory virus were identified from nasopharyngeal aspirates and throat swabs collected from children with bronchiolitis, bronchopneumonia and asthmatic bronchitis who visi-ted the Pediatrics of Affiliated Hospital to Shantou University, Shenzhen Fourth People's Hospital, Jieyang People's Hospital, during the period of June 2006 to June 2008. Respiratory virus was detected by multiplex PCR. Results Viruses were detected in 362 patients(52.77% ), among them, RSV infection was the most frequent, 31.22% of 113 patients. RHV was found in 16.85% (61 patients), IVA in 14.36% (52 pa-tients), ADV in 9.67% (35 patients), PIV in 16. 02% (58 patients), hBOV in 6. 08% (22 patients), hMPV in 4.97% ( 18 patients) and IVB in 0. 83% (3 patients). Conclusion The data indicate that RSV, RHV and IVA is an important etiological agent for respiratory infections in children during the survey period. RSV, IVA combined other virus are the most virus for combined infection, and the manages are worked out by the doctor for the diagnosis and treatment depended on the detected results of the pathogen.
2.The prevalence of human bocavirus among children with acute respiratory tract infection in Guangdong
Qiong WANG ; Guangyu LIN ; Fansheng ZENG ; Lie HUANG ; Renbing ZHOU ; Jian LIU ; Xuedong LU
Chinese Journal of Infectious Diseases 2010;28(2):89-93
Objective To investigate the prevalence of human bocavirus(HBoV)among children with acute respiratory tract infection(ARTI)in Guangdong Province.Methods Four hundred and forty-seven nasopharyngeal aspirates or swabs samples from children with ARTI in Guangdong Province were collected from June 2007 to May 2008.HBoV capsid protein VP gene fragments were detected using polymerase chain reaction(PCR).Positive PCR products were sequenced.The DNA and translated amino acid sequences were aligned with known HBoV sequences in GenBank and phylogenetic analysis was also done.Results The positive rate of HBOV was 5.1%of samples from 447 ARTI cases.Ten samples were positive for both HBoV and other respiratory virus,which was 43.5%of positive samples.The main diagnosis for HBoV positive children included wheezing pneumonia,bronchiolitis and bronchial pneumonia.HBoV positive children ranged from 42 days to 6 years old,and most of them were younger than one year.HBOV infection was more common during summer,early autumn and late spring.Through sequence alignment and phylogenetie analysis,the DNA sequences and amino acid sequences of VP gene fragments of isolated HBoV strains showed 97.8%-98.8%and 99.3%-100.0%identity with ST1,respectively.Conclusions HBoV is one of the important pathogens of lower respiratory tract infection in children in Guangdong Province,which is more prevalent in infants younger than one year.Although VP gene fragment of HBoV is conservative in general,there are still some missense mutations.
3.Viral etiology of acute infantile diarrhea in autumn and winter in Shenzhen
Qiong WANG ; Yu QIU ; Fansheng ZENG ; Laizhi YANG ; Lie HUANG ; Jian LIU ; Xuedong LU
Chinese Journal of Laboratory Medicine 2009;32(8):873-876
and adenovirns. The high rate of mixed viral infection brings clinical concern. ELISA combined with PCR improve the diagnostic sensitivity for norovirus, enteric adenovirns and astrovirus.
4.Combining neutrophil-lymphocyte ratio and platelet-lymphocyte ratio predicted the prognosis of hepatocellular carcinoma patients after liver transplantation
Yishan NIU ; Fansheng GUO ; Jinglin CAO ; Yang WANG ; Xin ZHAO ; Jian DOU ; Qiang ZENG
Chinese Journal of Organ Transplantation 2023;44(3):172-177
Objective:To explore the prognostic values of neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio(PLR)and NLR-PLR score for carcinoma(HCC)patients undergoing liver transplantation(LT).Methods:From July 2015 to October 2021, clinical data are retrospectively reviewed for 110 HCC patients undergoing orthotopic LT at Third Hospital of Hebei Medical University.The values of NLR and PLR were calculated.And the cut-off values of NLR and PLR were obtained by receiver operating characteristic (ROC) curve and then grouped according to the cut-off values.Survival time is analyzed by Kaplan-Meier method and Log-rank test performed for inter-group comparison.Univariate and multivariate analyses are performed based on Cox proportional risk regression model.NLR <3.37 and PLR <105.96 are denoted as 0 point while NLR ≥3.37 and PLR ≥105.96 as 1 point.Two points are added up as NLR-PLR score.According to NLR-PLR score, they are divided into 3 groups of 0, 1 and 2.Results:Median overall survival(OS)is 27 months in patients with NLR-PLR score 0, 26.5 months in patients with NLR-PLR score 1 and 6 months in patients with NLR-PLR score 2.Median OS in patients with NLR-PLR score 2 is significantly shorter than that in those with NLR-PLR score 0/1.And the difference is statistically significant( P<0.001).Median disease-free survival(DFS)is 24.5 months in NLR-PLR 0 group, 24 months in NLR-PLR 1 group and 6 months in NLR-PLR 2 group.The difference is statistically significant( P=0.002).Univariate analysis show that Child-Pugh grade, MELD score, NLR/PLR level, NLR-PLR score, complying with University of California San Francisco Criteria(UCSF)criteria and absence/presence of microvascular invasion(MVI)have an impact on patient survival.Further multivariate analysis show that NLR-PLR score, complying with UCSF criteria and MELD score are independent risk factors affecting patients' prognosis and survival. Conclusions:NLR, PLR and NLR-PLR score may predict long-term survival of patients.And NLR-PLR score is an independent risk factor for patient survival.It has more predictive value than NLR/PLR.
5.Hepatitis E virus infection in liver transplant recipients
Fansheng GUO ; Qiang ZENG ; Jian DOU
Organ Transplantation 2024;15(3):352-358
Hepatitis E virus infection is a common cause of acute viral hepatitis. In recent years, the incidence of hepatitis E has shown an increasing trend, which has gradually become an important cause of acute viral hepatitis worldwide. Age, sex, intensity of immunosuppression and socio-economic factors are all risk factors for hepatitis E virus infection. Liver transplant recipients require long-term use of immunosuppressive drugs for anti rejection treatment, prone to hepatitis E virus infection and at the risk of liver fibrosis and cirrhosis due to immunosuppression status. Therefore, special attention should be paid to liver transplant recipients in clinical practice. Meantime, related risk factors should be identified to assist diagnosis and take stricter preventive measures. According to literature review, the etiological characteristics of hepatitis E virus and the epidemiological characteristics, clinical manifestations, diagnosis and treatment of hepatitis E virus infection in liver transplant recipients were reviewed, aiming to properly monitor, treat and prevent hepatitis E virus infection in liver transplant recipients in clinical practice, improving the prognosis of liver transplant recipients.
6.High-throughput sequencing of miRNA from Schistosoma japonicum schistosomula
Guina XU ; Hongmei WANG ; Caixia CUI ; Xia ZHANG ; Fansheng ZENG ; Zhiqiang QIN
Chinese Journal of Endemiology 2020;39(6):396-401
Objective:To identify the expression level of known microRNA (miRNA) by high-throughput sequencing and analysis of the miRNA of Schistosoma japonicum schistosomula, and predict the miRNA target genes and their biological functions. Methods:Schistosoma japonicum schistosomula were prepared in vitro, and total RNA of schistosomula were extracted and analyzed to construct a library for performing high-throughput sequencing. The difference of miRNA expression was analyzed by using DEGseq R language package and perl script. Then the target genes and their biological functions of differential miRNA were predicted by miRanda software, Blast software, and KEGG database respectively. Results:There were 38 483 matching sequences in the miRNA expressed of Schistosoma japonicum schistomula in the constructed library compared with the latest miRBase database, and 60 miRNA were identified, sja-miR-125b was the miRNA with the highest expression, followed by sja-miR-61, sja-miR-71a, sja-miR-36-3p and sja-miR-10-5p, which accounted for 91% (3 263/3 585) of the total miRNA expression. MiRanda software predicted a total of 7 176 target genes, gene functions concentrated on nucleotide transferase activity, cellular nitrogen complex metabolism, molecular function, biological processes, biosynthesis, plasma membrane and protein maturation. The functional enrichment analysis showed that the highly expressed miRNA were mainly involved in pathogenic process, biological progress and multiple metabolic regulation pathways. Conclusions:The miRNA expressed significantly of Schistosoma japonicum schistomula mainly involved in the regulation of metabolic pathways during the differentiation, growth and pathogenesis of Schistosoma japonicum. To lay a foundation for the study of the regulatory mechanism of Schistosoma japonicum development and the development of new drugs.