1.Quantitative analysis of the expression of p53 gene in colorectal carcinoma by using real-time PCR.
Ivyna Pau Ni Bong ; Patricia Lim ; Pauline Balraj ; Edmund Sim Ui Hang ; Zubaidah Zakaria
Tropical biomedicine 2006;23(1):53-9
Colorectal carcinoma ranks third among ten leading causes of cancer in Malaysia. The colorectal carcinoma tumourigenesis involves the inactivation of tumour suppressor genes, and activation of proto-oncogenes. The p53 is one of the tumour suppressor genes that is involved in the colorectal carcinogenesis. The p53 gene is located on human chromosome 17p13.1 and comprises of 11 exons. Deficiencies in the p53 gene can cause the cancerous cells to spread to distant organs such as liver, lungs, lymph nodes, spine and bone. The most common p53 abnormalities that can lead to the metastasis of colorectal tumours are mutation and deregulation of the gene. In this study, nine colorectal carcinoma samples were used to establish a simple and sensitive strategy in the study on in vivo p53 expression by using realtime LightCycler SYBR Green I technology.
Colorectal
;
Genes, p53
;
Carcinoma
;
Quantitative
;
Polymerase Chain Reaction
2.Expression Trend of Selected Ribosomal Protein Genes in Nasopharyngeal Carcinoma
Xiang-Ru Ma ; Edmund Ui-Hang Sim ; Teck-Yee Ling ; Thung-Sing Tiong ; Selva Kumar Subramaniam ; Alan Soo-Beng Khoo
Malaysian Journal of Medical Sciences 2012;19(4):23-30
Background: Ribosomal proteins are traditionally associated with protein biosynthesis until recent studies that implicated their extraribosomal functions in human diseases and cancers. Our previous studies using GeneFishingTM DEG method and microarray revealed underexpression of three ribosomal protein genes, RPS26, RPS27, and RPL32 in cancer of the nasopharynx. Herein, we investigated the expression pattern and nucleotide sequence integrity of these genes in nasopharyngeal carcinoma to further delineate their involvement in tumourigenesis. The relationship of expression level with clinicopathologic factors was also statistically studied.
Methods: Quantitative Polymerase Chain Reaction was performed on nasopharyngeal carcinoma and their paired normal tissues. Expression and sequence of these three genes were analysed.
Results: All three ribosomal protein genes showed no significant difference in transcript expressions and no association could be established with clinicopathologic factors studied. No nucleotide aberrancy was detected in the coding regions of these genes.
Conclusion: There is no early evidence to substantiate possible involvement of RPS26, RPS27, and RPL32 genes in NPC tumourigenesis.