1.Impact of seasonal influenza on polyclinic attendances for upper respiratory tract infections in Singapore
Annabel C.Y. Soh ; Anurag Sharma ; David J. Muscatello
Western Pacific Surveillance and Response 2020;11(2):27-36
Purpose:
The burden of influenza on primary healthcare services is not well-established in tropical countries where there are no clearly defined influenza seasons. We aimed to estimate the association between influenza infection activity and polyclinic attendance rates for upper respiratory tract infections (URTI) in the Singapore population.
Methods:
We used generalized additive time series models to estimate the association between the proportion of respiratory tests positive for influenza infection in Singapore reported to the World Health Organization every week, and the population rate of polyclinic attendances in Singapore for physician-diagnosed URTI, which includes influenza-like illness (ILI), for a total of 6 years from 2012 through 2017. Where data were available, we controlled for other infections that can cause fever or respiratory symptoms.
Results:
Influenza, dengue fever and chickenpox (varicella) were positively associated with acute URTI polyclinic attendances. The estimated URTI polyclinic attendance rates attributable to influenza, dengue fever and chickenpox were 618.9 (95% confidence interval [CI] 501.6, 736.3), 153.3 (95% CI 16.5, 290.2) and 1751.5 (95% CI: 1246.3, 2256.8) per 100,000 population per year, respectively.
Conclusions
Influenza poses a considerable burden on primary healthcare services in Singapore. However, a substantial number of polyclinic attendances due to febrile infections such as dengue fever and chickenpox appear to be recorded as URTI in the polyclinic database. These associations require further investigation.
2.Monitoring mortality in the setting of COVID-19 pandemic control in Victoria, Australia: a time series analysis of population data
Lalitha Sundaresan ; Sheena G Sullivan ; David J Muscatello ; Daneeta Hennessy ; Stacey L Rowe
Western Pacific Surveillance and Response 2025;16(1):29-39
Objective: Mortality surveillance was established in the state of Victoria just before the COVID-19 pandemic. Here, we describe the establishment of this surveillance system, justify the modelling approach selected, and provide examples of how the interpretation of changes in mortality rates during the pandemic was influenced by the model chosen.
Methods: Registered deaths occurring in Victoria from 1 January 2015 to 31 December 2020 were sourced from the Victoria Death Index. Observed mortality rates were compared to a raw historical 5-year mean and to predicted means estimated from a seasonal robust regression. Differences between the observed mortality rate and the historical mean (delta-MR) and excess mortality rate from the observed and predicted rates were assessed.
Results: There were 20 375 COVID-19 cases notified in Victoria as of 31 December 2020, of whom 748 (3.7%) died. Victorians aged >=85 years experienced the highest case fatality ratio (34%). Mean observed mortality rates in 2020 (MR: 11.6; 95% confidence interval [CI]: 11.4, 11.9) were slightly reduced when compared with the annual rate expected using the historical mean method (mean MR: 12.2; 95% CI: 12.1, 12.3; delta-MR: -0.57; 95% CI: -0.77, -0.38), but not from the rate expected using the robust regression (estimated MR: 11.7; 95% prediction interval [PI]: 11.5, 11.9; EMR: -0.05; 95% CI: -0.26, 0.16). The two methods yielded opposing interpretations for some causes, including cardiovascular and cancer mortality.
Discussion: Interpretation of how pandemic restrictions impacted mortality in Victoria in 2020 is influenced by the method of estimation. Time-series approaches are preferential because they account for population trends in mortality over time.