1.Molecular and proteomic identification of Arthrobacter gandavensis isolated from cows with subclinical mastitis in a dairy farm
Martha Fabiola Rodriguez ; Arlen Patricia Gomez ; Claudia Marcela Parra
Malaysian Journal of Microbiology 2022;18(3):309-314
Aims:
The genus Arthrobacter is a pleomorphic and heterogeneous Gram-positive bacteria mainly isolated from the soil, only two species of Arthrobacter have been reported worldwide as pathogens of veterinary importance. This paper aims to report the isolation and identification of the Arthrobacter gandavensis from cows with subclinical mastitis at a dairy farm in the savanna of Bogotá, Colombia.
Methodology and results:
A total of 209 milk and skin samples were taken from cows with and without subclinical mastitis, nasal swabs from workers and the environment. All samples were cultured in blood and MacConkey agar and identified by 16S rRNA gene sequencing and mass spectrometry MALDI TOF-MS. From the isolates identified, 33 corresponded to Staphylococcus spp., nine to the Enterobacteriaceae family and seven from Arthrobacter spp. (only identified by MALDI-ToF MS). The A. gandavensis isolates were obtained from six different positive cows for the California mastitis test, all with a matching pattern corresponding to Arthrobacter gandavensis strain DSM N: 15046, isolated from milk from cows with subclinical mastitis in Belgium. Analysis of the 16S rRNA gene showed 100% genetic similarity with sequences of A. gandavensis previously reported in the NCBI databases.
Conclusion, significance and impact of study
The identification by MALDI-ToF-MS and molecular, as shown in this report, is important to provide data that allow us to approach the actual ecology of the opportunistic pathogens of subclinical mastitis, especially in regions where the infection is endemic.
Arthrobacter
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Cattle--microbiology
2.An overview of calf diarrhea - infectious etiology, diagnosis, and intervention.
Journal of Veterinary Science 2014;15(1):1-17
Calf diarrhea is a commonly reported disease in young animals, and still a major cause of productivity and economic loss to cattle producers worldwide. In the report of the 2007 National Animal Health Monitoring System for U.S. dairy, half of the deaths among unweaned calves was attributed to diarrhea. Multiple pathogens are known or postulated to cause or contribute to calf diarrhea development. Other factors including both the environment and management practices influence disease severity or outcomes. The multifactorial nature of calf diarrhea makes this disease hard to control effectively in modern cow-calf operations. The purpose of this review is to provide a better understanding of a) the ecology and pathogenesis of well-known and potential bovine enteric pathogens implicated in calf diarrhea, b) describe diagnostic tests used to detect various enteric pathogens along with their pros and cons, and c) propose improved intervention strategies for treating calf diarrhea.
Animals
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Cattle
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*Cattle Diseases/diagnosis/drug therapy/microbiology/prevention & control
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Diarrhea/diagnosis/microbiology/prevention & control/*veterinary
3.Surveillance of Escherichia coli O157:H7 among animals in Jiangsu province in 1999.
Daxin NI ; Hua WANG ; Ling GU ; Xiling GUO ; Ling ZHUANG ; Ping SHI ; Hao PAN ; Zhiyang SHI ; Xiaoshu HU ; Guangzhong LIU
Chinese Journal of Epidemiology 2002;23(2):102-104
OBJECTIVETo understand the Escherichia coli O157:H7 carrier rate of host animals and the toxic gene of the strains in different areas in Jiangsu province.
METHODSSurveillance spots were set up in different areas, to collect feces of pigs, chickens, sheep, cattle to culture for O157:H7 with immunomagnetic separation as well as detection of toxic gene of the strain with MPCR were both carried out.
RESULTSOne hundred and seventy strains of O157:H7 were separated from 1 767 feces of different animals in six spots, with a overall positive rate 9.62%. The positive rates of cattle and sheep were 19.05% and 12.01% respectively. Among 85 strains SLT1, SLT2, eaeA and hly toxic genes were detected. In which, 56.47% of the strains were positive curturely while 79.17% of them carried SLT2, eaeA and hly gene simultaneously.
CONCLUSIONThe positive rate of O157:H7 in animals and the positive rates of strains were correlated to the incidence of the area. The highest rates were seen in areas where there had been O157:H7 epidemic, followed by the areas where there were only scattered cases identified while the lowest was in areas with no patients. Data indicated that it was important to enforce the surveillance of O157:H7 in animals to better predict and control of the disease.
Animals ; Cattle ; microbiology ; Chickens ; microbiology ; China ; Escherichia coli O157 ; isolation & purification ; Rabbits ; microbiology ; Sheep ; microbiology ; Swine ; microbiology ; Time Factors
4.Brucella Endocarditis with Splenic Abscess: A Report of the First Case Diagnosed in Korea.
Sang Hyun PARK ; Young Sill CHOI ; Yu Jeong CHOI ; Soung Hoon CHO ; Hee Jung YOON
Yonsei Medical Journal 2009;50(1):142-146
Human brucellosis has a broad spectrum of clinical manifestations, which includes endocarditis, a focal complication that is uncommon yet responsible for the majority of associated deaths. The most successful treatment outcomes of Brucella endocarditis have been reported with usage of both antimicrobial agents and surgery. However, there are few reports on the treatment of Brucella endocarditis using antibiotics only. We report the first case in Korea of Brucella endocarditis with aortic valve vegetations and an accompanying splenic abscess, which were treated successfully with antibiotic therapy alone.
Abscess/*microbiology
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Animals
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Aortic Valve/microbiology
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*Brucella abortus
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Brucellosis/*diagnosis
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Cattle
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Dairying
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Endocarditis/*microbiology
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Humans
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Korea
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Male
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Middle Aged
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Occupational Diseases/*microbiology
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Spleen/microbiology
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Zoonoses
5.Active surveillance on Listeria monocytogenes in seven kinds of food in 11 provinces of China in 2001.
Shu-yu WU ; Ying-hui LI ; Lu RAN ; Ping FU ; Zhi-gang LI ; Jing-hui YAO
Chinese Journal of Epidemiology 2003;24(8):657-660
OBJECTIVETo carry out national active surveillance on Listeria monocytogenes in foods in China.
METHODSFour thousand and thirty-four random samples from raw meat, meat product, raw milk, vegetable, yoghurt, icecream and aquatic product were collected in 11 provinces (cities), and examined for Listeria monocytogenes according to the national standard method and confirmed by BAX system (DuPont Qualicon, Wilmington, DE).
RESULTSSeventy isolates four kinds of foods in seven provinces were found to have LM according to the national standard method with a total isolate rate of 1.74%. In Fujian, the rate was higher than in the other provinces. Raw meat was found to be most heavily contaminated in seven kinds of foods. Comparing to national standard method, BAX system showed good sensitivity (> 98%) and specificity (> 97%).
CONCLUSIONIn each province seven kinds of food were all contaminated by Listeria monocytogenes to some degrees, suggesting that local sanitary surveillance should be strengthened. BAX system can be used to correctly and quickly screen Listeria monocytogenes.
Animals ; Cattle ; China ; Food Microbiology ; Listeria monocytogenes ; isolation & purification ; Meat ; microbiology ; Meat Products ; microbiology ; Milk ; microbiology ; Seafood ; microbiology ; Sensitivity and Specificity ; Sheep ; Swine
6.Performance of the SD Bioline TB Ag MPT64 Rapid test for quick confirmation of Mycobacterium bovis isolates from animals.
Hyeon Seop BYEON ; Mi Jung JI ; Shin Seok KANG ; Sang Woo KIM ; Seung Cheol KIM ; Song Yong PARK ; Geehyuk KIM ; Jiro KIM ; Jang Eun CHO ; Bok Kyung KU ; Jae Myung KIM ; Bo Young JEON
Journal of Veterinary Science 2015;16(1):31-35
Mycobacterium (M.) bovis, a bacterium in the M. tuberculosis complex, is a causative agent of bovine tuberculosis, a contagious disease of animals. Mycobacterial culture is the gold standard for diagnosing bovine tuberculosis, but this technique is laborious and time-consuming. In the present study, performance of the SD Bioline TB Ag MPT4 Rapid test, an immunochromatographic assay, was evaluated using reference bacterial strains and M. bovis field isolates collected from animals. The SD MPT64 Rapid test produced positive results for 95.5% (63/66) of the M. bovis isolates from cattle and 97.9% (46/47) of the isolates from deer. Additionally, the test had a sensitivity of 96.5% (95% CI, 91.2-99.0), specificity of 100% (95% CI, 96.7-100.0), positive predictive value of 100% (95% CI, 96.7-100.0), and negative predictive value of 92.9% (95% CI, 82.7-98.0) for M. bovis isolates. In conclusion, the SD MPT64 Rapid test is simple to use and may be useful for quickly confirming the presence of M. bovis in animals.
Animals
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Cattle
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Cattle Diseases/*diagnosis/microbiology
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*Deer
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Immunochromatography/methods/*veterinary
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Mycobacterium bovis/classification/*isolation & purification
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Sensitivity and Specificity
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Tuberculosis/diagnosis/microbiology/*veterinary
7.Prevalence and Molecular Epidemiology of Vancomycin-Resistant Enterococci (VRE) Strains Isolated from Animals and Humans in Korea.
Joon Young SONG ; In Sook HWANG ; Joong Sik EOM ; Hee Jin CHEONG ; Won Ki BAE ; Yong Ho PARK ; Woo Joo KIM
The Korean Journal of Internal Medicine 2005;20(1):55-62
BACKGROUND: To assess the possibility of VRE transmission from animals to humans, we studied the prevalence of vancomycin-resistant enterococci (VRE) in farm animals, raw chicken meat, and healthy people. We then determined the molecular relatedness of VRE isolates between animals and humans in Korea. METHODS: We aimed to isolate VRE from 150 enterococci specimens of farm animals, 15 raw chicken meat samples, and stools from 200 healthy people. Species differentiation was done with conventional biochemical tests. Vancomycin resistance genotyping was done by polymerase chain reaction (PCR). Using the agar dilution method, antimicrobial susceptibility was tested for 8 antimicrobials and pulsed-field gel electrophoresis (PFGE) was done to evaluate the molecular relatedness of VRE isolates. RESULTS: The prevalence of VRE was 14.7% (22/150) in farm animal specimens, 1% (2/200) in healthy people, and 60% (9/15) in raw chicken meat. Of 22 animal VRE isolates, 1 vanA E. faecium, 15 vanC1 E. gallinarum, and 6 vanC2 E. casseliflavus were identified. All of the 9 VRE from raw chicken meat and all of the 20 clinical VRE strains were vanA E. faecium. However, in healthy people, only 2 vanC2 E. casseliflavus were isolated. These showed low-level resistance to vancomycin and susceptibility to teicoplanin. However, 9 VRE strains from raw chicken meat had high-level resistance to vancomycin (MIC50, 90: > 128 microgram/mL), teicoplanin (MIC50, 90: > 128 microgram/mL), ampicillin (MIC50, 90: > 128 microgram/mL), erythromycin (MIC50, 90: > 128 microgram/mL), and tetracycline (MIC50/90: 128/> 128 microgram/mL). CONCLUSION: This study demonstrated little evidence of VRE colonization in healthy people despite high recovery of VRE among raw chicken meat. It is suggested that there is little evidence of VRE transmission from animals to healthy people. However, we assumed that there exists the possibility of VRE contamination during the processing of chicken meat.
Animals
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Cattle/microbiology
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Chickens
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Enterococcus/*drug effects/*isolation & purification
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Feces/microbiology
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Humans
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Korea
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Meat/microbiology
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Prevalence
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Research Support, Non-U.S. Gov't
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Swine/microbiology
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*Vancomycin Resistance
8.Development of a real-time SYBR Green PCR assay for the rapid detection of Dermatophilus congolensis.
Alfredo GARCIA ; Remigio MARTINEZ ; Jose Manuel BENITEZ-MEDINA ; David RISCO ; Waldo Luis GARCIA ; Joaquin REY ; Juan Manuel ALONSO ; Javier Hermoso DE MENDOZA
Journal of Veterinary Science 2013;14(4):491-494
Methods such as real time (RT)-PCR have not been developed for the rapid detection and diagnosis of Dermatophilus (D.) congolensis infection. In the present study, a D. congolensis-specific SYBR Green RT-PCR assay was evaluated. The detection limit of the RT-PCR assay was 1 pg of DNA per PCR reaction. No cross-reaction with nucleic acids extracted from Pseudomonas aeruginosa, Mycobacterium tuberculosis, Staphylococcus aureus, or Austwickia chelonae was observed. Finally, the RT-PCR assay was used to evaluate clinical samples collected from naturally infected animals with D. congolensis. The results showed that this assay is a fast and reliable method for diagnosing dermatophilosis.
Actinomycetales/*isolation & purification
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Actinomycetales Infections/diagnosis/microbiology/*veterinary
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Animals
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Cattle
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Cattle Diseases/*diagnosis/microbiology
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Fluorescent Dyes/*diagnostic use
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Horse Diseases/*diagnosis/microbiology
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Horses
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Limit of Detection
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Real-Time Polymerase Chain Reaction/*methods/veterinary
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Reproducibility of Results
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Sheep
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Sheep Diseases/*diagnosis/microbiology
9.A multiplex real-time PCR for differential detection and quantification of Salmonella spp., Salmonella enterica serovar Typhimurium and Enteritidis in meats.
Su Hwa LEE ; Byeong Yeal JUNG ; Nabin RAYAMAHJI ; Hee Soo LEE ; Woo Jin JEON ; Kang Seuk CHOI ; Chang Hee KWEON ; Han Sang YOO
Journal of Veterinary Science 2009;10(1):43-51
Salmonella (S.) Typhimurium and S. Enteritidis are the major causative agents of food-borne illnesses worldwide. Currently, a rapid detection system using multiplex real-time polymerase chain reaction (PCR) has been applied for other food-borne pathogens such as Escherichia coli, Staphylococcus aureus and Streptococcus spp. A multiplex real-time PCR was developed for the simultaneous detection of Salmonella spp., especially S. Typhimurium and S. Enteritidis, in beef and pork. For the specific and sensitive multiplex real-time PCR, three representative primers and probes were designed based on sequence data from Genbank. Among the three DNA extraction methods (boiling, alkaline lysis, and QIAamp DNA Mini Kit), the QIAamp DNA Mini Kit was the most sensitive in this study. The optimized multiplex real-time PCR was applied to artificially inoculated beef or pork. The detection sensitivity of the multiplex real-time PCR was increased. The specificity of the multiplex real-time PCR assay, using 128 pure-cultured bacteria including 110 Salmonella isolates and 18 non-Salmonella isolates, was 100%, 100% and 99.1% for Salmonella spp., S. Typhimurium and S. Enteritidis, respectively. The sensitivity was 100%, 100% and 91.7% for Salmonella spp., S. Typhimurium and S. Enteritidis, respectively. The multiplex real-time PCR assay developed in this study could detect up to 0.54 +/- 0.09 and 0.65 +/- 0.07 log10 CFU/ml for S. Typhimurium and S. Enteritidis for beef, 1.45 +/- 0.21 and 1.65 +/- 0.07 log10 CFU/ml for S. Typhimurium and S. Enteritidis for pork, respectively, with all conditions optimized. Our results indicated that the multiplex real-time PCR assay developed in this study could sensitively detect Salmonella spp. and specifically differentiate S. Typhimurium from S. Enteritidis in meats.
Animals
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Cattle
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DNA, Bacterial
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*Food Microbiology
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Meat/*microbiology
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Polymerase Chain Reaction/*veterinary
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Salmonella/*isolation & purification
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Sensitivity and Specificity
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Swine
10.A study on bio-electrochemical method for detecting environment-polluted germs.
Yongjun ZHOU ; Zhiyuan LU ; Zhongqi NIU ; Anhui LIANG
Journal of Biomedical Engineering 2007;24(6):1237-1240
Hyperplasia of germs in biologic cell can consume certain amount of oxygen and thus will lay the foundation on which to metabolize and produce some substance. Using a Biologic cell, we have designed a kind of electric equipment for measurement which can quickly detect the environment-polluted germs, and take a sample of the environment-polluted germs in fresh milk and the microzyme in the process of beer produced. Adding proper amount of bio-coenzyme and ion-incentive to the germs liquor, we use the electric equipment to detect the sample in order to investigate the process of electron generation and germ's metabolization, including the measurement of the oxidation-reduction between the pole and the coenzyme, and the electrochemistry process of every reaction matter in the liquor. The result of our study shows that the method can effectively check the germ's number in fresh milk, and when compared to the traditional method (plate cultivating germs), it has the advantages of quickness, convenience and timeliness.
Animals
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Bacteria
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isolation & purification
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Beer
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microbiology
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Biosensing Techniques
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methods
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Cattle
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Electrochemistry
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Food Contamination
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analysis
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Milk
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microbiology
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Sensitivity and Specificity