1.In vitro biological screening of the stem of Desmodium elegans
Arshad KHAN ; Rabia USMAN ; Mingliang WANG ; Abdur RAUF ; Naveed MUHAMMAD ; Akhatar AMAN
Asian Pacific Journal of Tropical Biomedicine 2013;(9):711-715
Objective:To explore the medicinal importance of the stem of Desmodium elegans, methanolic extract, and its different solvent fractions were evaluated for brine shrimp lethality, insecticidal and phytotoxicity, antifungal, and antibacterial activities.
Methods:The methanolic extract and its solvent fractions were tested for cytotoxic, phytotoxic, insecticidal, antifungal, and antibacterial effects using our previous published protocols.
Results:The methanolic, DCM, ethyl acetate and n-butanol fractions exhibited insecticidal effect against Callosobruchus analis and Rhyzopertha dominic. The methanolic extract, n-hexane, DCM ethyl acetate and n-butanol showed 75, 85, 85, 65 and 5%phytotoxicity at the tested concentration of 500μg/mL respectively. The solvent fractions (DCM and ethyl acetate) were effective against F. solani (10%and 20%inhibition respectively). All the tested samples were devoid of cytotoxic and antibacterial effects.
Conclusions:It was concluded that this plant can be practiced for control of weeds and insects.
2.A genome‑wide approach to the systematic and comprehensive analysis of LIM gene family in sorghum (Sorghum bicolor L.)
Md. Abdur Rauf SARKAR ; Salim SARKAR ; Md. Shohelul ISLAM ; Fatema Tuz ZOHRA ; Shaikh Mizanur RAHMAN
Genomics & Informatics 2023;21(3):e36-
The LIM domain-containing proteins are dominantly found in plants and play a significant role in various biological processes such as gene transcription as well as actin cytoskeletal organization. Nevertheless, genome-wide identification as well as functional analysis of the LIM gene family have not yet been reported in the economically important plant sorghum (Sorghum bicolor L.). Therefore, we conducted an in silico identification and characterization of LIM genes in S. bicolor genome using integrated bioinformatics approaches. Based on phylogenetic tree analysis and conserved domain, we identified five LIM genes in S. bicolor (SbLIM) genome corresponding to Arabidopsis LIM (AtLIM) genes. The conserved domain, motif as well as gene structure analyses of the SbLIM gene family showed the similarity within the SbLIM and AtLIM members. The gene ontology (GO) enrichment study revealed that the candidate LIM genes are directly involved in cytoskeletal organization and various other important biological as well as molecular pathways. Some important families of regulating transcription factors such as ERF, MYB, WRKY, NAC, bZIP, C2H2, Dof, and G2-like were detected by analyzing their interaction network with identified SbLIM genes. The cis-acting regulatory elements related to predicted SbLIM genes were identified as responsive to light, hormones, stress, and other functions. The present study will provide valuable useful information about LIM genes in sorghum which would pave the way for the future study of functional pathways of candidate SbLIM genes as well as their regulatory factors in wet-lab experiments.
3. In vivo sedative and muscle relaxants activity of Diospyros lotus L
Abdur RAUF ; Ghias UDDIN ; Bina Shaheen SIDDIQUI ; Haroon KHAN
Asian Pacific Journal of Tropical Biomedicine 2015;5(4):277-280
OBJECTIVE: To evaluate the sedative effect of Diospyros lotus L (D. lotus) extract in mice using the open field and Rota rod tests. METHODS: For the sedative and muscle relaxants activities of extract/fractions of the plant, in-vivo open field and phenobarbitone-induced sleeping time were used, while the Roda rod test was employed in animals for the assessment of muscle relaxant activity. RESULTS: Results from this investigation revealed that the extracts of D. lotus have exhibited significant sedative effect in mice (45.98%) at 100 mg/kg i.p. When the extract was partitioned with different solvents, the n-hexane fraction was inactive whereas the chloroform fraction was the most active with 82.67% sedative effect at 50 and 100 mg/kg i.p. On the other hand, the ethyl acetate and n-butanol fractions displayed significant sedative effects (55.65% and 40.87%, respectively) at 100 mg/kg i.p. Among the tested extract/fractions, only chloroform and ethyl acetate fractions showed significant (P < 0.05) muscle relaxant activity in the Rota rod test. CONCLUSIONS: In short, our study provided scientific background to the traditional uses of D. lotus as sedative.
4.Antipyretic and antinociceptive activity of Diospyros lotus L. in animals.
Abdur RAUF ; Ghias UDDIN ; Bina S SIDDIQUI ; Naveed MUHAMMAD ; Haroon KHAN
Asian Pacific Journal of Tropical Biomedicine 2014;4(Suppl 1):S382-6
OBJECTIVETo evaluate pharmacologically the traditional use of Diospyros lotus as antipyretic and antinociceptive in various animal models.
METHODSIn vivo experimental models were used in this study. Antipyretic activity of extract/fractions was evaluated in brewer's yeast induced hyperthermic mice while antinociceptive activity was studied in acetic acid induced writhing test at 50 and 100 mg/kg i.p.
RESULTSThe crude extract strongly ameliorated the induced pyrexia during various assessment times. Upon fractionation, the antipyretic effects were strongly augmented by the chloroform and ethyl acetate fractions of the plant. However, hexane and butanol fractions were insignificant in their effect as antipyretic. The extract showed marked inhibition on the noxious simulation induced by post acetic acid injection. The effect was strongly supported by other fraction expect hexane.
CONCLUSIONSIn short, our study scientifically validated the traditional use of the plant as antipyretic.
5.Three new anthraquinone derivatives isolated from Symplocos racemosa and their antibiofilm activity.
Umar FAROOQ ; Sara KHAN ; Sadia NAZ ; Ajmal KHAN ; Afsar KHAN ; Ayaz AHMED ; Abdur RAUF ; Syed Majid BUKHARI ; Shujaat Ali KHAN ; Arfa KAMIL ; Nadia RIAZ ; Abdur Rahman KHAN
Chinese Journal of Natural Medicines (English Ed.) 2017;15(12):944-949
Three new alkyl substituted anthraquinone derivatives, trivially named as symploquinones A-C (Compounds 1-3) were isolated from Symplocos racemosa. The structures of these compounds were determined on the basis of extensive spectroscopic analyses (UV, IR, Mass, H- and C-NMR, and two-dimensional (2D) NMR techniques). The resulting data were also compared with the reported literature. These compounds were then subjected to antibacterial or antibiofilm testing. Compounds 1 and 3 exhibited good antibacterial activity in the concentration range of 160-83 μg·mL against Streptococcus mutans, methicillin resistant Staphylococcus aureus and Proteus mirabilis. Both compounds were further screened for anti-biofilm activity, which revealed promising activities at sub-MIC concentrations. None of the compounds were found to be active against Klebsiella pneumoniae.
Anthraquinones
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chemistry
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isolation & purification
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pharmacology
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Anti-Bacterial Agents
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chemistry
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isolation & purification
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pharmacology
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Biofilms
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drug effects
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growth & development
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Ericales
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chemistry
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Magnetic Resonance Spectroscopy
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Mass Spectrometry
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Methicillin-Resistant Staphylococcus aureus
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drug effects
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physiology
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Microbial Sensitivity Tests
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Proteus mirabilis
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drug effects
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physiology
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Spectrophotometry, Infrared
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Streptococcus mutans
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drug effects
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physiology
6.Sedative and antinociceptive activities of two new sesquiterpenes isolated from Ricinus communis.
Umar FAROOQ ; Ajmal KHAN ; Sadia NAZ ; Abdur RAUF ; Haroon KHAN ; Afsar KHAN ; Irfan ULLAH ; Syed Majid BUKHARI
Chinese Journal of Natural Medicines (English Ed.) 2018;16(3):225-230
Two new sesquiterpenes, trivially named ricinusoids A (1) and ricinusoids B (2), were isolated from ethyl acetate fraction of Ricinus communis. The structures of new compounds were elucidated by detailed spectroscopic techniques, including 1D- and 2D-NMR, UV, IR spectroscopy, and mass spectrometry. The compounds (1-2) were also assessed for in-vivo sedative and analgesic like effects in open field and acetic acid induced writhing tests respectively at 5, 10, and 20 mg·kg i.p. Pretreatment of both test compounds caused significant (P ≤ 0.05) reduction in locomotive activity like sedative agents and abdominal constrictions like analgesics. Both compounds (1-2) possessed marked sedative and antinociceptive effects in animal models.
Analgesics
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administration & dosage
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chemistry
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isolation & purification
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Animals
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Humans
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Hypnotics and Sedatives
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administration & dosage
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chemistry
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isolation & purification
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Locomotion
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drug effects
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Male
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Mice
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Mice, Inbred BALB C
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Molecular Structure
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Pain
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drug therapy
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physiopathology
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Plant Extracts
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administration & dosage
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chemistry
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isolation & purification
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Plant Leaves
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chemistry
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Ricinus
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chemistry
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Sesquiterpenes
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administration & dosage
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chemistry
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isolation & purification
7.Phytochemical composition, biological potential and enzyme inhibition activity of Scandix pecten-veneris L.
Abdul WAHAB ; Syed Aleem JAN ; Abdur RAUF ; Zia Ur REHMAN ; Zahid KHAN ; Aftab AHMED ; Fatima SYED ; Sher Zaman SAFI ; Hamayun KHAN ; Muhammad IMRAN
Journal of Zhejiang University. Science. B 2018;19(2):120-129
OBJECTIVE:
Scandix pecten-veneris L. is a less studied wild edible herb and is considered an extinct plant species in many parts of the world. This study was designed to evaluate its phytochemical composition and biological potential of S. pecten-veneris L.
METHODS:
Phytochemicals including alkaloids, flavonoids, polyphenols, and tannins were determined in extracts of S. pecten-veneris. Antioxidant activity was determined using 2,2-diphenyl-1-picrylhydrazyl (DPPH), while reducing power was tested by ferric reducing/antioxidant power (FRAP) assay. Antimicrobial activity against seven bacterial and four fungal strains was evaluated using agar well diffusion assay. Enzymes inhibition study was performed for urease, phosphodiesterase-I, and catalase-II.
RESULTS:
S. pecten-veneris showed moderate antiradical activity and reducing potential of hydroxyl radicals to about 20% of the initial value. The antioxidant activity of various extracts of S. pecten-veneris showed a linear correlation with total phenolic contents in the order of water>n-butanol>chloroform>ethyl acetate>methanol extracts. S. pecten-veneris leaves showed the highest inhibitory activity against Staphylococcus aureus while the highest antifungal activity was observed against Candida albicans. The plant extract was most potent against urease enzymes but showed moderate activity against phosphodiestrase-I and carbonic anhydrase-II.
CONCLUSIONS
Our data demonstrate that in addition to its culinary uses, S. pecten-veneris has good medicinal potential and hence could be used for treating some specific health ailments.
Animals
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Anti-Infective Agents/pharmacology*
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Antioxidants/pharmacology*
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Apiaceae/chemistry*
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Enzyme Inhibitors/pharmacology*
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Phosphodiesterase Inhibitors/pharmacology*
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Phytochemicals/analysis*
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Plant Extracts/pharmacology*
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Plants, Edible/chemistry*
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Staphylococcus aureus/drug effects*
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Urease/antagonists & inhibitors*
8.Bioassay-guided isolation of novel and selective urease inhibitors from Diospyros lotus.
Abdur RAUF ; Ghias UDDIN ; Bina S SIDDIQUI ; Ajmal KHAN ; Umar FAROOQ ; Farhan A KHAN ; Syed Majid BUKHARI ; Sher Bahadar KHAN
Chinese Journal of Natural Medicines (English Ed.) 2017;15(11):865-870
Two new dimeric naphthoquinones, 5',8'-dihydroxy-6,6'-dimethyl-7,3'-binaphthyl-1,4,1',4'-tetraone (1; Di-naphthodiospyrol D) and 5',8'-dihydroxy-5,8-dimethoxy-6,6'-dimethyl-7,3'-binaphthyl-1,4,1',4'-tetraone (2; Di-naphthodiospyrol E), along with known naphthoquinones diospyrin (3) and 8-hydroxy diospyrin (4) were isolated from the chloroform fraction of extract of Diospyros lotus roots. Their structures were elucidated by advanced spectroscopic analyses, including HSQC, HMBC, NOESY, and J-resolved NMR experiments. The fractions and compounds 1-4 were evaluated for urease activity and phosphodiesterase-I, carbonic anhydrase-II and α-chymotrypsin enzyme inhibitory activities. Compounds 1 and 2 and their corresponding fractions showed significant and selective inhibitory effects on urease activities. The IC values of 1 and 2 were 260.4 ± 6.37 and 381.4 ± 4.80 µmol·L, respectively, using thiourea (IC = 21 ± 0.11 µmol·L) as the standard inhibitor. This was the first report demonstrating that the naphthoquinones class showed urease inhibition.
Biological Assay
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Diospyros
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chemistry
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Enzyme Inhibitors
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chemistry
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isolation & purification
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pharmacology
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Molecular Structure
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Naphthoquinones
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chemistry
;
isolation & purification
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pharmacology
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Plant Extracts
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chemistry
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pharmacology
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Plant Roots
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Urease
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antagonists & inhibitors