1.Case of a non-pulsatile groin swelling.
M A Mohamed Razif ; V Rajasingam ; B J J Abdullah
The Medical journal of Malaysia 2002;57(4):499-502
We report a case of a non-pulsatile groin swelling in a 38 years old male drug addict without the typical clinical signs of an aneurysm. Ultrasound revealed a left femoral artery pseudo-aneurysm. He was surgically treated and the vessels were ligated without revascularisation.
Swelling
;
groin <1>
;
Aneurysm
;
Drug addict
;
Aspects of signs
2.Validation Of The Malay Version Of The Kratom Dependence Scale (KDS) Among Malaysian Kratom (Mitragyna Speciosa Korth) Users
Mohammad Farris Iman Leong Abdullah, ; Darshan Singh ; B. Vicknasingam Kasinather ; Nizuwan Azman
ASEAN Journal of Psychiatry 2018;19(1):8-
Introduction: Kratom (Mitragyna speciosa Korth) dependence is a common psychiatric complication associated with regular kratom use in Malaysia. Hence, it is important to assess the severity of kratom dependence among regular kratom users. The Kratom Dependence Scale (KDS) was introduced to evaluate the degree of severity of kratom dependence among users. This study aimed to translate the original English version of the KDS into Malay and examine the psychometric properties of the KDS (Malay) among Malaysian kratom users. Methods: Initially, parallel translation and back translation of the original English version of the KDS was performed. The KDS (Malay) then was administered to 20 active Malaysian kratom users to assess face and content validities in a pilot study. Finally, the final version was administered to 150 active kratom users to evaluate its internal consistency (Cronbach’s α), face and content validities, discriminative validity, and construct validity, i.e. via exploratory factor analysis (EFA). Results: The KDS (Malay) Cronbach’s α of 0.94 exhibited excellent internal consistency. It also demonstrated construct validity, as EFA showed that all items of the KDS (Malay) fit into a single domain, similar to the original English version. Discriminative validity was also demonstrated by the KDS (Malay), as it could differentiate kratom dependent users from non-kratom dependent users. Conclusion: The KDS (Malay) has acceptable psychometric properties and is suitable to assess severity of kratom dependence in Malaysian kratom users.
3.Light microscopy and molecular identification of Sarcocystis spp. in meat producing animals in Selangor, Malaysia
Tropical Biomedicine 2015;32(3):444-452
One thousand and forty-five tissue samples of skeletal muscles, tongue, heart,
diaphragm and esophagus were collected from 209 animals (43 sheep, 89 goats and 77 cattle)
from an abattoir in Selangor between February and October, 2013. Each sample was divided
into three pieces with each piece measuring 2-3 mm3. Each piece was then squeezed between
two glass slides and examined microscopically at x 10 magnification for the presence of
sarcocystosis. Three positive samples from each animal species were then fixed in 10%
formalin for histological processing. Seven positive samples collected from each animal
species were preserved at -80°C or 90% ethanol for gene expression studies. Microsarcocysts
were detected in 114 (54.5%) animals by light microscopy (LM). The infection rates in sheep,
goat and cattle were 86, 61.8 and 28.6% respectively. The highest rate of infection was in the
skeletal muscles of sheep (64.9%) and goats (63.6%) and in the heart of cattle (63.6%). The
cysts were spindle to oval in shape and two stages were recognized, the peripheral metrocytes
and centrally located banana-shaped bradyzoites. 18S rRNA gene expression studies confirmed
the isolates from the sheep as S. ovicanis, goats as S. capracanis and cattle as S. bovicanis.
This, to the best of our knowledge, is the first molecular identification of an isolate of S.
ovicanis and S. capracanis in Malaysia. Further studies with electron microscopy (EM) are
required in the future to compare the features of different types of Sarcocysts spp.
4.Diagnostic Utility of Osteocalcin, Undercarboxylated Osteocalcin, and Alkaline Phosphatase for Osteoporosis in Premenopausal and Postmenopausal Women.
Sacide ATALAY ; Abdullah ELCI ; Huseyin KAYADIBI ; Can B ONDER ; Nurettin AKA
Annals of Laboratory Medicine 2012;32(1):23-30
BACKGROUND: We aimed to investigate the diagnostic utility of osteocalcin (OC), undercarboxylated osteocalcin (ucOC), and alkaline phosphatase (ALP) in pre- and postmenopausal women for femoral neck, L1-4, and L2-4 bone mineral density (BMD) values by taking into consideration their age, body mass index (BMI), and menopausal status. METHODS: Premenopausal (N=40) and postmenopausal cases (N=42) were classified as 25-34 or 35-45 yr of age and within the first 5 yr or 5 yr or more after the onset of menopause, respectively. RESULTS: Among the groups, statistical differences were found for age, BMI, OC, ucOC, ALP, femoral neck BMD, L1-4 BMD, and L2-4 BMD. The highest serum OC, ucOC, and ALP levels were observed in cases within the first 5 yr after the onset of menopause, probably due to a more rapid bone turnover rate. The best predictors for the femoral neck osteoporosis were ALP, OC, and calcium (areas under the ROC curve [AUC]=0.882, 0.829, and 0.761, respectively), and those for L1-4 and L2-4 osteoporosis were OC, ALP, and ucOC (AUC=0.949, 0.873, and 0.845; and 0.866, 0.819, and 0.814, respectively). Multiple logistic regression analysis revealed that the most discriminative parameter for osteoporosis was OC. CONCLUSIONS: These results indicate that serum OC levels, with or without ucOC and ALP, may be useful to monitor follow-up changes that currently cannot be assessed with BMD and to diagnose femoral neck, L1-4 spine, and L2-4 spine osteoporosis.
Adult
;
Aged
;
Alkaline Phosphatase/*blood
;
Body Mass Index
;
Bone Density
;
Discriminant Analysis
;
Female
;
Follow-Up Studies
;
Humans
;
Logistic Models
;
Middle Aged
;
Osteocalcin/*blood
;
Osteoporosis/blood/*diagnosis
;
Osteoporosis, Postmenopausal/blood/diagnosis
;
Postmenopause
;
Premenopause
5.Effect of alginate chemical disinfection on bacterial count over gypsum cast.
Satheesh B HARALUR ; Omir S AL-DOWAH ; Naif S GANA ; Abdullah AL-HYTHAM
The Journal of Advanced Prosthodontics 2012;4(2):84-88
PURPOSE: To evaluate the efficacy of sodium hypochlorite (1 : 10) and iodophor disinfectants on alginate impressions along with their effect on the survived bacterium count on the gypsum cast. MATERIALS AND METHODS: Four alginate impression on each dentate patients were made, of which Group I were not washed or disinfected, Group II impressions were merely washed with water, Group III were disinfected by spraying with sodium hypochlorite (1 : 10), Group IV were disinfected with iodophor (1 : 213). Gypsum cast (type III) were made from all the impression. Impressions and gypsum cast were swabbed in mid palatal region for bacterial culture. Bacterial colony counting done after 3 days of incubation at 37degrees C in blood agar media. The data obtained was analyzed by one way ANOVA test at a significant difference level of 0.05. RESULTS: Group I and Group II showed significantly more bacteria compared to Group III and Group IV. Bacterial colonies on the alginate impression and gypsum cast in group disinfected with Sodium hypochlorite (1 : 10) were 0.18, 0.82 respectively compared to group treated with iodophor (1 : 213). There was an increase in bacterial count on dental cast compared to source alginate impressions. CONCLUSION: Sodium hypochlorite (1 : 10) was found to be better disinfectant for alginate impression. There was an indication of increase in number of bacteria from alginate impression to making of dental cast. Additional gypsum cast disinfectant procedures need to be encouraged to completely eliminate cross infection to dental laboratory.
Agar
;
Alginates
;
Bacteria
;
Bacterial Load
;
Calcium Sulfate
;
Cross Infection
;
Disinfectants
;
Disinfection
;
Glucuronic Acid
;
Hexuronic Acids
;
Humans
;
Infection Control
;
Laboratories, Dental
;
Sodium Hypochlorite
;
Water
7.The impact of serving in disaster relief among volunteers in Malaysia.
Hoi Yen CHEN ; Che An AHMAD ; Khatijah Lim ABDULLAH
Chinese Journal of Traumatology 2021;24(4):237-248
PURPOSE:
Malaysian disaster relief volunteers have a long and proud history of participating in relief missions within and outside the country. Despite of a plethora of researches into the various areas of disaster relief, there has been a little scholarly activity looking into the experiences of the medical volunteers worldwide and even less research on the experiences of the relief volunteers in Malaysia. Therefore, the purpose of this study is to identify the effect of disaster relief works on volunteers in Malaysia.
METHODS:
This is a non-experimental cross-sectional design study, which was conducted using survey questionnaire to examine the incidence of burnout, posttraumatic stress disorder (PTSD) symptoms and the quality of life (QOL) among the disaster relief volunteers. And the study also examined the socio-demographic variables of the participants. In addition, the association between the sociodemographic variable and the preferred coping strategies was also investigated through self-reporting checklist.
RESULTS:
The findings of this study revealed that 90.9% volunteers (n = 312) experienced some levels of recurring stress throughout their lives, which led to burnout. Also, 96.8% (n = 332) of the participants were categorized as having at least some symptoms of PTSD. However, self-reporting QOL measurements indicated that the participants are, in general, satisfied with their lives. Significant associations between the incidence of burnout, incidence of PTSD and QOL were identified. Both positive coping measures and behavioral or avoidant coping measures were also identified. Furthermore, a number of socio-demographic factors were also seen to interact significantly with burnout, PTSD and QOL.
CONCLUSION
This study provides some insights into the psychological challenges of disaster relief volunteers in Malaysia, and this impact can last a long time after the volunteers return to their hometowns. Several recommendations including practice development, policy and research were discussed in the study.
8.Development, Translation and Validation of Enhanced Asian Rome III Questionnaires for Diagnosis of Functional Bowel Diseases in Major Asian Languages: A Rome Foundation-Asian Neurogastroenterology and Motility Association Working Team Report.
Uday C GHOSHAL ; Kok Ann GWEE ; Minhu CHEN ; Xiao R GONG ; Nitesh PRATAP ; Xiaohua HOU ; Ari F SYAM ; Murdani ABDULLAH ; Young Tae BAK ; Myung Gyu CHOI ; Sutep GONLACHANVIT ; Andrew S B CHUA ; Kuck Meng CHONG ; Kewin T H SIAH ; Ching Liang LU ; Lishou XIONG ; William E WHITEHEAD
Journal of Neurogastroenterology and Motility 2015;21(1):83-92
BAome III criteria. METHODS: After EAR3Q was developed by Asian experts by cCKGROUND/AIMS: The development-processes by regional socio-cultural adaptation of an Enhanced Asian Rome III questionnaire (EAR3Q), a cultural adaptation of the Rome III diagnostic questionnaire (R3DQ), and its translation-validation in Asian languages are presented. As English is not the first language for most Asians, translation-validation of EAR3Q is essential. Hence, we aimed to culturally adapt the R3DQ to develop EAR3Q and linguistically validate it to show that the EAR3Q is able to allocate diagnosis according to Ronsensus, it was translated into Chinese, Hindi-Telugu, Indonesian, Korean, and Thai, following Rome Foundation guidelines; these were then validated on native subjects (healthy [n = 60], and patients with irritable bowel syndrome [n = 59], functional dyspepsia [n = 53] and functional constipation [n = 61]) diagnosed by clinicians using Rome III criteria, negative alarm features and investigations. RESULTS: Experts noted words for constipation, bloating, fullness and heartburn, posed difficulty. The English back-translated questionnaires demonstrated concordance with the original EAR3Q. Sensitivity and specificity of the questionnaires were high enough to diagnose respective functional gastrointestinal disorders (gold standard: clinical diagnoses) in most except Korean and Indonesian languages. Questionnaires often uncovered overlapping functional gastrointestinal disorders. Test-retest agreement (kappa) values of the translated questionnaires were high (0.700-1.000) except in Korean (0.300-0.500) and Indonesian (0.100-0.400) languages at the initial and 2-week follow-up visit. CONCLUSIONS: Though Chinese, Hindi and Telugu translations were performed well, Korean and Indonesian versions were not. Questionnaires often uncovered overlapping FGIDs, which were quite common.
Asia
;
Asian Continental Ancestry Group*
;
Constipation
;
Diagnosis*
;
Dyspepsia
;
Follow-Up Studies
;
Gastrointestinal Diseases
;
Heartburn
;
Humans
;
Irritable Bowel Syndrome
;
Surveys and Questionnaires*
;
Sensitivity and Specificity
;
Translations
9.TELS: A Novel Computational Framework for Identifying Motif Signatures of Transcribed Enhancers.
Dimitrios KLEFTOGIANNIS ; Haitham ASHOOR ; Vladimir B BAJIC
Genomics, Proteomics & Bioinformatics 2018;16(5):332-341
In mammalian cells, transcribed enhancers (TrEns) play important roles in the initiation of gene expression and maintenance of gene expression levels in a spatiotemporal manner. One of the most challenging questions is how the genomic characteristics of enhancers relate to enhancer activities. To date, only a limited number of enhancer sequence characteristics have been investigated, leaving space for exploring the enhancers' DNA code in a more systematic way. To address this problem, we developed a novel computational framework, Transcribed Enhancer Landscape Search (TELS), aimed at identifying predictive cell type/tissue-specific motif signatures of TrEns. As a case study, we used TELS to compile a comprehensive catalog of motif signatures for all known TrEns identified by the FANTOM5 consortium across 112 human primary cells and tissues. Our results confirm that combinations of different short motifs characterize in an optimized manner cell type/tissue-specific TrEns. Our study is the first to report combinations of motifs that maximize classification performance of TrEns exclusively transcribed in one cell type/tissue from TrEns exclusively transcribed in different cell types/tissues. Moreover, we also report 31 motif signatures predictive of enhancers' broad activity. TELS codes and material are publicly available at http://www.cbrc.kaust.edu.sa/TELS.
Enhancer Elements, Genetic
;
Genomics
;
methods
;
Humans
;
Nucleotide Motifs
;
Sequence Analysis, DNA
;
methods
;
Transcription, Genetic
10.The impact of ipsilateral testicular atrophy on semen quality and sperm DNA fragmentation response to varicocele repair.
Parviz K KAVOUSSI ; Natasha ABDULLAH ; Melissa S GILKEY ; Caitlin HUNN ; G Luke MACHEN ; Shu-Hung CHEN ; Keikhosrow M KAVOUSSI ; Amy ESQUEDA ; J David WININGER ; Shahryar K KAVOUSSI
Asian Journal of Andrology 2021;23(2):146-149
Varicoceles adversely impact semen quality and sperm DNA fragmentation, which typically improve with surgical repair. Some men with varicoceles have ipsilateral testicular atrophy due to damage from the varicocele. This study assessed semen quality and the sperm DNA fragmentation index (DFI) response to varicocele repair in men with ipsilateral testicular atrophy (TA) versus men with no testicular atrophy (NTA). Semen parameter values and DFI in both groups were compared preoperatively and postoperatively. The Mann-Whitney U test and the Wilcoxon signed-rank test were used where appropriate. There were 20 men in the TA group and 121 men in the NTA group with no difference in age, varicocele grade, or preoperative semen parameter values between the two groups. The NTA group had a higher preoperative DFI than the TA group. Both groups showed improvement in semen quality postoperatively, only the TA group showed a significant improvement in DFI, whereas the NTA group showed significant improvements in several parameter values and DFI. The change from preoperative to postoperative parameter values when comparing the two groups revealed a difference in total sperm motile count and DFI, with a larger mean improvement in the NTA group than in the TA group. Both TA and NTA groups showed improved semen quality and DFI after varicocele repair, but the NTA group had more improvement than the TA group. However, only total motile count (TMC) and DFI had a significantly greater mean change in preoperative to postoperative response in the NTA group than in the TA group.