1.Identification bacteria associated with Haliclona sp. sponges from Enggano Island, Indonesia with antimicrobial activity against human pathogens
Sipriyadi ; Uci Cahlia ; Welly Darwis ; Risky Hadi Wibowo ; Enny Nugraheni ; Mardhatillah Sariyanti
Malaysian Journal of Microbiology 2021;17(2):178-189
Aims:
Antimicrobial compounds are bioactive compounds that have ability to inhibit microbial growth activities. This
study aimed to screen and identify bacteria associated with Haliclona sp. sponges from Enggano Island, Indonesia that
had potential to produce antimicrobial compounds against Escherichia coli, Candida albicans and Staphylococcus
epidermidis.
Methodology and results:
The method used to screen and identify bacteria in this study including screening assay,
morphological identification, Gram staining and spore staining method, biochemical tests and molecular identification
based on 16S rRNA gene. This study resulted 16 isolates which were successfully isolated from Haliclona sp. According
to screening assay, 5 isolates could potentially produce antimicrobial compounds coded as HEBS1, HEBS3, HEBS6,
HEBB2 and HEBB3. Based on Gram staining, spore staining, biochemical test and molecular identification results,
HEBS1 had proximity to Brachybacterium paraconglomeratum, HEBS3 had proximity to Kocuria palustris, HEBS6 had
proximity to Psychrobacter pasificensis, HEBB2 had proximity to Bacillus aryabhattai, and HEBB3 had proximity to
Bacillus toyonensis.
Conclusion, significance and impact of study
From 16 isolates that successfully isolated, there were 5 isolates that
could potentially produce antimicrobial compounds against Escherichia coli, Staphylococcus epidermidis and Candida
albicans. These isolates can be served as antimicrobial compounds producer. However, identification and purification of
these antimicrobial compounds are needed to be done before applied it for medicine in the future.
Haliclona--microbiology
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Host-Pathogen Interactions
2.Microbes and host dance in harmony or disarray?
Protein & Cell 2018;9(5):395-396
3.A dynamically evolving war between autophagy and pathogenic microorganisms.
Qianqian ZHENG ; Liangwei DUAN ; Yang ZHANG ; Jiaoyang LI ; Shiyu ZHANG ; Hui WANG
Journal of Zhejiang University. Science. B 2022;23(1):19-41
Autophagy is an intracellular degradation process that maintains cellular homeostasis. It is essential for protecting organisms from environmental stress. Autophagy can help the host to eliminate invading pathogens, including bacteria, viruses, fungi, and parasites. However, pathogens have evolved multiple strategies to interfere with autophagic signaling pathways or inhibit the fusion of autophagosomes with lysosomes to form autolysosomes. Moreover, host cell matrix degradation by different types of autophagy can be used for the proliferation and reproduction of pathogens. Thus, determining the roles and mechanisms of autophagy during pathogen infections will promote understanding of the mechanisms of pathogen‒host interactions and provide new strategies for the treatment of infectious diseases.
Autophagy
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Bacteria
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Host-Pathogen Interactions
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Lysosomes
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Signal Transduction
4.Viral miRNA: dancing for commensalism?.
Yuan DONG ; Chao QIU ; Jian-Qing XU
Chinese Journal of Virology 2011;27(6):624-628
5.Immunomodulatory Roles of PE/PPE Proteins and Their Implications in Genomic Features of Mycobacterium tuberculosis.
Soo Young CHOI ; Sung Jae SHIN
Journal of Bacteriology and Virology 2015;45(3):272-281
Tuberculosis, caused by Mycobacterium tuberculosis (Mtb), remains a notorious cause of human death worldwide. A deeper understanding of the proline-glutamate (PE) and proline-proline-glutamate (PPE) families, which compromise 10% of the coding regions in the Mtb genome, has uncovered their unique roles in host-pathogen interactions. Further, comparative genomic analysis of different Mtb strains has proposed that Mtb has acquired diverse gene sets that play immunomodulatory roles in host-pathogen interactions. This review delineates the various immunomodulatory roles of PE/PPE antigens and discusses their implications in the development of the improved diagnostic tools and vaccines.
Clinical Coding
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Genome
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Host-Pathogen Interactions
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Humans
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Immunomodulation
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Mycobacterium tuberculosis*
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Mycobacterium*
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Tuberculosis
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Vaccines
6.Host immune responses to mycobacterial antigens and their implications for the development of a vaccine to control tuberculosis.
Clinical and Experimental Vaccine Research 2014;3(2):155-167
Tuberculosis (TB) remains a worldwide health problem, causing around 2 million deaths per year. Despite the bacillus Calmette Guerin vaccine being available for more than 80 years, it has limited effectiveness in preventing TB, with inconsistent results in trials. This highlights the urgent need to develop an improved TB vaccine, based on a better understanding of host-pathogen interactions and immune responses during mycobacterial infection. Recent studies have revealed a potential role for autophagy, an intracellular homeostatic process, in vaccine development against TB, through enhanced immune activation. This review attempts to understand the host innate immune responses induced by a variety of protein antigens from Mycobacterium tuberculosis, and to identify future vaccine candidates against TB. We focus on recent advances in vaccine development strategies, through identification of new TB antigens using a variety of innovative tools. A new understanding of the host-pathogen relationship, and the usefulness of mycobacterial antigens as novel vaccine candidates, will contribute to the design of the next generation of vaccines, and to improving the host protective immune responses while limiting immunopathology during M. tuberculosis infection.
Autophagy
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BCG Vaccine
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Host-Pathogen Interactions
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Immunity, Innate
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Mycobacterium tuberculosis
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Tuberculosis*
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Vaccines
7.Insertional Mutation of ftsH Gene in Streptococcus pneumoniae Causes Stress Sensitivities.
Journal of Bacteriology and Virology 2004;34(1):9-18
FtsH is a membrane-bound, ATP-dependent protease involved in various cellular functions. To understand its roles in Streptococcus pneumoniae and host-pathogen interactions, we inactivated the ftsH gene of D39 strain by inserting a tetracycline-resistance (tet) gene. Several recombinants containing the tet cassette within the ftsH gene were confirmed by Western immunoblotting for the absence of pneumococcal FtsH protein that could cross-react with antiserum raised against Escherichia coli FtsH. Compared with the wild-type D39 strain, the ftsH null mutants grew slowly with encapsulation and alpha-hemolysis on blood agar plates, but failed to grow in liquid media other than Todd Hewitt yeast extract broth. Even fresh cultures of ftsH null mutants appeared gram-negative. When the incubation temperature of liquid cultures was shifted from 37degrees C to 40degrees C, the mutants gradually lysed, whereas the shift to 30degrees C abolished further growth. The mutants also exhibited increased sensitivity to salt and remarkable growth inhibition by optochin. These observations suggest that no functional FtsH protein in pneumococcal cells causes a loss of cell surface integrity, resulting in impairment of cell growth under normal and stressful conditions.
Agar
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ATP-Dependent Proteases
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Blotting, Western
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Escherichia coli
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Host-Pathogen Interactions
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Streptococcus pneumoniae*
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Streptococcus*
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Yeasts
8.Insertional Mutation of ftsH Gene in Streptococcus pneumoniae Causes Stress Sensitivities.
Journal of Bacteriology and Virology 2004;34(1):9-18
FtsH is a membrane-bound, ATP-dependent protease involved in various cellular functions. To understand its roles in Streptococcus pneumoniae and host-pathogen interactions, we inactivated the ftsH gene of D39 strain by inserting a tetracycline-resistance (tet) gene. Several recombinants containing the tet cassette within the ftsH gene were confirmed by Western immunoblotting for the absence of pneumococcal FtsH protein that could cross-react with antiserum raised against Escherichia coli FtsH. Compared with the wild-type D39 strain, the ftsH null mutants grew slowly with encapsulation and alpha-hemolysis on blood agar plates, but failed to grow in liquid media other than Todd Hewitt yeast extract broth. Even fresh cultures of ftsH null mutants appeared gram-negative. When the incubation temperature of liquid cultures was shifted from 37degrees C to 40degrees C, the mutants gradually lysed, whereas the shift to 30degrees C abolished further growth. The mutants also exhibited increased sensitivity to salt and remarkable growth inhibition by optochin. These observations suggest that no functional FtsH protein in pneumococcal cells causes a loss of cell surface integrity, resulting in impairment of cell growth under normal and stressful conditions.
Agar
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ATP-Dependent Proteases
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Blotting, Western
;
Escherichia coli
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Host-Pathogen Interactions
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Streptococcus pneumoniae*
;
Streptococcus*
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Yeasts
10.Roles of lipid droplets in hepatitis C virus life cycle.
Xiao-Jie YANG ; Lei-Liang ZHANG
Chinese Journal of Virology 2014;30(1):91-97
Lipid droplets are the main storage organelles for intracellular neutral lipids. Many recent studies have found that lipid droplets are closely related to hepatitis C virus (HCV). Lipid droplets play important roles in the multiple processes of HCV life cycle, such as infection, replication, assembly, and secretion. In this review, we summarize the recent research progress in the roles of lipid droplets in HCV life cycle.
Animals
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Hepacivirus
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metabolism
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physiology
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Host-Pathogen Interactions
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Humans
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Lipid Metabolism
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Organelles
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virology
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Viral Proteins
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metabolism