1.Cytogenetic Analysis of Chromosomal Abnormalities in Children.
Key Young SONG ; Kwang Man KIM ; Hong Dae CHA ; Joon Sik KIM ; Heung Sik KIM ; Chin Moo KANG
Journal of the Korean Pediatric Society 1990;33(2):153-161
No abstract available.
Child*
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Chromosome Aberrations*
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Cytogenetic Analysis*
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Cytogenetics*
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Humans
2.Next generation sequencing and array-based comparative genomic hybridization for molecular diagnosis of pediatric endocrine disorders.
Annals of Pediatric Endocrinology & Metabolism 2017;22(2):90-94
Next-generation sequencing (NGS) and array-based comparative genomic hybridization (array CGH) have enabled us to perform high-throughput mutation screening and genome-wide copy number analysis, respectively. These methods can be used for molecular diagnosis of pediatric endocrine disorders. NGS has determined the frequency and phenotypic variation of mutations in several disease-associated genes. Furthermore, whole exome analysis using NGS has successfully identified several novel causative genes for endocrine disorders. Array CGH is currently used as the standard procedure for molecular cytogenetic analysis. Array CGH can detect various submicroscopic genomic rearrangements involving exons or enhancers of disease-associated genes. This review introduces some examples of the use of NGS and array CGH for the molecular diagnosis of pediatric endocrine disorders.
Comparative Genomic Hybridization*
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Cytogenetic Analysis
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Diagnosis*
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Exome
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Exons
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Mass Screening
3.Unbalanced translocation der(8)t(8:13)(p23.3;q32.1)dn identified by array CGH and subtelomeric FISH in a patient with mental retardation.
Soomin LEE ; Dongsuk LEE ; Hyunah JEONG ; Kichul KIM ; Doyeong HWANG
Journal of Genetic Medicine 2008;5(1):65-68
Molecular cytogenetics allows the identification of unknown chromosome rearrangements, which is clinically useful in patients with mental retardation and/or development delay. We report on a 31-year- old woman with severe mental retardation, behavior development delay, and verbal performance delay. Conventional cytogenetic analysis showed a 46,XX,add(8)(p23.3) karyotype. To determine the origin of this unbalanced translocation, we performed array CGH and subtelomeric FISH. The results showed that the distal region of chromosome 8p was added to the terminal of chromosome 13q. This was confirmed the final result of 46,XX,der(8)t(8:13)(p23.3;q32.1)dn.
Cytogenetic Analysis
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Cytogenetics
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Female
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Humans
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Intellectual Disability
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Karyotype
4.Cytogenetic Analysis of the Transitional Cell Carcinomas of the Bladder.
Korean Journal of Urology 2000;41(8):940-947
No abstract available.
Carcinoma, Transitional Cell*
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Cytogenetic Analysis*
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Cytogenetics*
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Urinary Bladder*
5.Application and modification of methods for chromosome culture, preparation and analysis.
Chinese Journal of Medical Genetics 2017;34(6):915-918
Chromosome analysis has been widely used in clinics including prenatal diagnosis. To obtain high-quality metaphase chromosomes, researchers have attempted to modify the methods for chromosome culture, preparation and analysis. Some large research centers also tried to establish standards for quality control. In this paper, modification of methods for the preparation of chromosomes in the last decade is reviewed.
Cells, Cultured
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Chromosomes, Human
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Cytogenetic Analysis
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Humans
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Karyotyping
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Metaphase
7.Chromosome Analysis of Ascitic Fluids from Patients with Malignant Tumor.
Seung Wan RYU ; Ki Yong CHUNG ; Dae Kwang KIM
Korean Journal of Anatomy 1999;32(5):619-627
Detecting malignant cells in ascitic fluid from tumor patients is important since the existence of malignant cells in ascitic fluids is related to the prognosis of patients. Various laboratory methods are being used to obtain diagnosis in ascitic fluids, but some ascitic fluids can not be diagnosed reliably. Cytogenetic analysis of ascitic fluid is not used routinely as a laboratory tool. In this presentation a cytogenetic study of the ascitic fluids from 9 patients with malignant tumor was performed by a direct or short-term culture method. According to cytogenetic study, 5 cases had positive findings for malignant cells. One case had a inconclusive result. There were no malignant cells in the remaining 4 cases. On blind cytologic data, no informations could be obtained in 4 out of 9 cases and the remaining 5 cases had negative findings for detecting malignant cells. Among the 5 cases, cytogenetic findings were negative in 3 cases but in the remaining 2 cases, one was reported positive and the other inconclusive each other. In present study, even though the ascitic fluids from 5 patients were subjected to the comparison of the cytologic study with cytogenetic analysis, two different findings could be obtained. Therefore if further study of a large series of cancer patients with ascitic fluids is done, the value of cytogenetic analysis will be clearly shown. In addition, the cytogenetic study of cell present in ascitic fluids can be used as useful adjunct to cytologic study, and also it can indicate that more invasive diagnostic procedures are necessary.
Ascitic Fluid*
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Cytogenetic Analysis
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Cytogenetics
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Diagnosis
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Humans
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Prognosis
8.Cytogenetic analysis of the primary urinary bladder cancer.
Min Ja YIM ; Soo Il KIM ; Won Sik KIM ; Sung Ik CHANG
Korean Journal of Anatomy 1993;26(3):235-245
No abstract available.
Cytogenetic Analysis*
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Cytogenetics*
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Urinary Bladder Neoplasms*
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Urinary Bladder*
9.Interim In vitro Dose-Response Curve for the Dicentric Biodosimeter Assay from a Philippine Radiotherapy Facility using a Linear Accelerator
Antonio Carlo D. De Guzman ; Carmencita D. Padilla ; Henri Cartier S. Co ; Elrick T. Inocencio ; Edsel Allan G. Salonga
Acta Medica Philippina 2021;55(1):117-125
Background. Accidental radiation exposure can occur anytime. Biodosimeters help in quantifying the absorbed dose of individuals who are not equipped with personal dosimeters during radiation exposure. The dicentric assay can quantify radiation damage by correlating radiation dose exposure with the frequency of dicentric chromosomes in the peripheral lymphocytes extracted from exposed individuals.
Objective. The study aims to present the interim results of the reference dose-response curve for a Philippine radiotherapy facility constructed using a 6MV linear accelerator (ClinacX, Varian).
Methods. Samples of peripheral blood from healthy volunteers were irradiated in a customized water phantom of doses 0.10 to 5.0 Gray using a linear accelerator. The irradiated samples were cultured and analyzed following the International Atomic Energy Agency Cytogenetic Dosimetry Protocol (2011) with modifications. Linear-quadratic model curve fitting and further statistical analysis were done using CABAS (Chromosome Aberration Calculation Software Version 2.0) and Dose Estimate (Version 5.2). Interim results of the samples were used to generate these curves.
Results. The dose-response curve generated from the preliminary results were comparable to published dose response curves from international cytogenetic laboratories.
Conclusion. The generated dose-response calibration curve will be useful for medical triage of the public and radiologic staff accidentally exposed to radiation during medical procedures or in the event of nuclear accidents.
Cytogenetics
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Biological Assay
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Chromosome Disorders
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Cytogenetic Analysis
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Radiation
10.Karyotype analysis of cryopreserved mononuclear cells from cord blood.
Ki Young KU ; Mi Ae CHU ; Ji Yoon KIM ; Kun Soo LEE
Journal of Genetic Medicine 2008;5(1):55-60
PURPOSE: The ability to perform chromosome analysis of cryopreserved cord blood mononuclear cells is important for future retrospective studies. We compared the karyotypes of cryopreserved cells with cells before cryopreservation. METHODS: One cord blood (CB) sample was obtained from normal healthy volunteer. Karyotype analysis was performed before cryopreservation. After mononuclear cell separation with Ficoll-Hypaque, the mononuclear cells were cryopreserved by programmed controlled-rate freezer and then transferred into the liquid nitrogen (-196 degrees C) for 3 days. After rapid thawing, cytogenetic analysis was performed as the same method for each sample by different conditions. The samples were divided by three groups. The first group was no culture before cryopreservation, the second group was 72 hours culture before cryopreservation, but no 24 hours culture after thawing and the third group was 72 hours culture before cryopreservation and 24 hours culture after thawing. RESULTS: The chromosome analysis was successful in the second and third groups of CB sample. CONCLUSION: The successful result from CB samples may suggest the usefulness of long-term cryopreservation for retrospective study in various clinical settings including hematologic malignancies.
Cell Separation
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Cryopreservation
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Cytogenetic Analysis
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Fetal Blood
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Karyotype
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Nitrogen
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Retrospective Studies