Polymorphisms of 19 Autosomal STR Loci in Sichuan Han Population and Their Forensic Application.
10.12116/j.issn.1004-5619.2020.03.009
- Author:
Yun HUANG
1
;
Yu Zhuo WANG
2
;
Feng SONG
1
Author Information
1. West China School of Basic Medical Sciences & Forensic Medicine, Chengdu 610041, China.
2. Sichuan Qiushi Forensic Service, Chengdu 610011, China.
- Publication Type:Journal Article
- Keywords:
forensic genetics;
polymorphism, genetic;
short tandem repeat;
genetics, population;
autosome;
Han population;
Sichuan
- MeSH:
Asian People/genetics*;
China;
Ethnicity/genetics*;
Gene Frequency;
Genetics, Population;
Humans;
Microsatellite Repeats;
Phylogeny;
Polymorphism, Genetic
- From:
Journal of Forensic Medicine
2020;36(3):341-346
- CountryChina
- Language:English
-
Abstract:
Objective To investigate the allele distribution, population genetics parameters and genetic analysis of neighboring populations of 19 autosomal STR loci in Sichuan Han population, and to evaluate their forensic application value. Methods The Goldeneye?? DNA ID system 20A was used to perform multiplex PCR amplification and allelic gene typing of 19 STR loci in 1 201 unrelated Han individuals from Sichuan Province. Allele frequencies and population genetics parameters were calculated. The Nei's genetic distances between Sichuan Han population and 12 previously reported populations were analyzed. Multidimensional scaling and principal component analysis were carried out and phylogenetic trees were also constructed. Results The heterozygosity of 19 STR loci ranged from 0.617 0 to 0.915 1, their discrimination power ranged from 0.777 4 to 0.986 5, matching probability ranged from 0.013 5 to 0.222 6, polymorphism information content ranged from 0.546 4 to 0.910 5, probability of exclusion ranged from 0.311 8 to 0.826 3 （triplet） and from 0.197 9 to 0.712 1 （biplet）, and no significant deviations from Hardy-Weinberg equilibrium were observed. Based on the results of multidimensional scaling, principal component analysis and phylogenetic trees of the genetic distances between Sichuan Han population and the other 12 populations, Sichuan Han population was closest to Hubei Han population and was farthest to Xinjiang Uygur population. Conclusion The 19 autosomal STR loci showed a high polymorphism and discriminating ability in Sichuan Han population, which can provide a data foundation for personal identification, paternity test and population genetics study.
