Identification and expression analysis of NRT1 family genes in Rehmannia glutinosa.
10.19540/j.cnki.cjcmm.20210124.102
- Author:
Li GU
1
;
Feng-Qing WANG
2
;
Ming-Jie LI
1
;
Mei-Gui LIN
3
;
Jian-Ming WANG
3
;
Feng-Ji WANG
3
;
Zhong-Yi ZHANG
1
Author Information
1. College of Agriculture,Fujian Agriculture and Forestry University Fuzhou 350002,China Key Laboratory of Ministry of Education for Genetics,Breeding and Multiple Utilization of Crops,Fujian Agriculture and Forestry University Fuzhou 350002,China.
2. College of Agronomy,Henan Agricultural University Zhengzhou 450002,China.
3. College of Agriculture,Fujian Agriculture and Forestry University Fuzhou 350002,China.
- Publication Type:Journal Article
- Keywords:
NRT1 proteins;
Rehmannia glutinosa;
expression analysis;
sequencing
- MeSH:
Anion Transport Proteins;
Membrane Transport Proteins;
Nitrates;
Phylogeny;
Plant Proteins/metabolism*;
Rehmannia/genetics*;
Transcriptome
- From:
China Journal of Chinese Materia Medica
2021;46(11):2788-2797
- CountryChina
- Language:Chinese
-
Abstract:
NRT1 family proteins play an important roles for absorbing and transporting of nitrate in different plants. In order to identify the NRT1 family genes of Rehmannia glutinosa, this study used 11 NRT1 homologous proteins of Arabidopsis as probe sequences and aligned with the transcriptome data of R. glutinosa by using NCBI BLASTN software. Resulting there were 18 NRT1 proteins were identified in R. glutinosa. On basis of this, a series of the molecular characteristics of R. glutinosa NRT1 proteins including the conserved domains, the transmembrane structure, the subcellular location and phylogenetic features were in detail analyzed. At same time, it were systematically analyzed that the temporal and spatial expression patterns and characteristics of R. glutinosa NRT1 family genes in response to different stress factors. The results indicated that 18 R. glutinosa NRT1 family genes with the length of coding region from 1 260 bp to 1 806 bp, encoded proteins ranging from 419 to 601 amino acids, and all of they owned the domains of typical peptide transporter with 7 to 12 transmembrane domains. These R. glutinosa NRT1 family proteins mostly were found to locate on cellular plasma membrane, and belonged to the hydrophobic proteins. Furthermore, the evolutionary analysis found that the 18 R. glutinosa NRT1 protein family could be divided into two subfamilies, of which 14 NRT1 family genes might occur the positive selection, and 4 genes occur the passivation selection during the evolution process of R. glutinosa. In addition the expression analysis showed that 18 R. glutinosa NRT1 family genes have the distinct expression patterns in different tissues of R. glutinosa, and their expression levels were also obvious difference in response to various stress. These findings infield that 18 R. glutinosa NRT1 family proteins might have obviously different functional roles in nitrate transport of R. glutinosa. In conclusion, this study lays a solid theoretical foundation for clarifying the absorption and transport molecular mechanism of N element during R. glutinosa growth and development, and at same time for deeply studying the molecular function of R. glutinosa NRT1 proteins in absorption and transport of nitrate.
