Construction of EST-SSR identification system for Lilium lancifolium and main edible Lilium
10.7501/j.issn.0253-2670.2020.16.027
- VernacularTitle: 卷丹及主要食用百合EST-SSR鉴别体系的构建
- Author:
Yi-Qing HOU
1
Author Information
1. Institute of Biotechnology 2. Gansu Provincial Hospital, Lanzhou 730070, China, Gansu Academy of Agricultural Sciences
- Publication Type:Journal Article
- Keywords:
Edible Lilium;
EST-SSR;
Lilium L.;
Lilium lancifolium Thunb.;
Molecular identification
- From:
Chinese Traditional and Herbal Drugs
2020;51(16):4308-4315
- CountryChina
- Language:Chinese
-
Abstract:
Objective: To develop the EST-SSR molecular identification system of Lilium lancifolium, Lilium davidii var. willmottiae, Lilium regale, Lilium casa blanca and Lilium brownie var. viridulum, and analyze the development efficiency and identification ability of EST-SSR molecular marker technology for Lilium genus. Methods: The MISA.pl program was used to identify the SSR locus of the EST gene sequence published by NCBI. The EST-SSR primers were generated by Primer3 program module, and the primers were screened by PCR amplification and agarose gel electrophoresis. The primary screening primers were verified by polyacrylamide gel electrophoresis, and the characteristic bands of different germplasms were labeled and analyzed to construct an identification system. Results: A total of 199 pairs of SSR primers were designed. After screening 26 pairs of primers, two pairs of highly efficient primers were obtained. The molecular identification system constructed by primer JZ391 can effectively identify the mixed commercial materials, which had certain practical value. Conclusion: Based on the extreme genetic characteristics of the research materials, this identification marker development is very efficient. The results confirm that the genetic basis of the species is an important factor affecting the development efficiency of its EST-SSR molecular marker. At the same time, this case can be used as a reference for the development of EST-SSR markers for other Chinese medicinal herbs similar to Lilium genus.
