Identification of mutations associated with coronary artery lesion susceptibility in Kawasaki disease by targeted enrichment of genomic region sequencing technique
10.3760/cma.j.issn.0578-1310.2017.07.012
- VernacularTitle: 靶向捕获测序技术检测川崎病冠状动脉损害易感基因研究
- Author:
Danying ZHU
1
;
Sirui SONG
;
Lijian XIE
;
Feng QIU
;
Jing YANG
;
Tingting XIAO
;
Min HUANG
Author Information
1. Department of Cardiology, Shanghai Children′s Hospital, Shanghai Jiao Tong University, Shanghai 200062, China
- Publication Type:Clinical Trail
- Keywords:
Mucocutaneous lymph node syndrome;
Genes;
Child
- From:
Chinese Journal of Pediatrics
2017;55(7):529-533
- CountryChina
- Language:Chinese
-
Abstract:
Objective:To screen and identify the mutations in Kawasaki disease by targeted enrichment of genomic region sequencing technique and investigate susceptibility genes associated with coronary artery lesion.
Method:This was a case-control study.A total of 114 patients diagnosed as Kawasaki disease treated in Shanghai Children′s Hospital between December 2015 and November 2016 were studied and another 45 healthy children who were physically examined in outpatient department were enrolled as control group. Patients were divided into two groups based on the results of echocardiogram. Peripheral venous blood was obtained from patients and controls. Genomic DNA was extracted. SeqCap EZ Choice libraries were prepared by targeted enrichment of genomic region technology. Then the libraries were sequenced to identify susceptibility genes associated with coronary artery lesion in patients diagnosed as Kawasaki disease.Susceptible genes were identified by Burden test, Pearson chi-square test or Fisher′s exact probability test.
Result:There was statistically significant difference in TNFRSF11B(rs2073618)G>C(p.N3K)mutation and GG/GC/CC genotype between Kawasaki disease group and control group(χ2=15.52, P=0.00). There was statistically significant difference in TNFRSF13B(rs34562254)C>T(p.P251L)mutation(χ2=10.40, P=0.01)and LEFTY1(rs360057)T>G(p.D322A)mutation(χ2=8.505, P=0.01)between patients with coronary artery lesions and those without.
Conclusion:Targeted enrichment of genomic region sequencing technology can be used to do primary screening for the susceptible genes associated with coronary artery lesions in Chinese Kawasaki patients and may provide theoretical basis for larger sample investigation of risk prediction score standard in Kawasaki disease.
