Analysis for Eight ABO Alleles in Korean Population.
10.3343/kjlm.2006.26.5.374
- Author:
Sang Hoon SONG
1
;
Ho Eun CHANG
;
Kwang Chul RYU
;
Hyun Jung LEE
;
Kyoung Un PARK
;
Junghan SONG
;
Kyou Sup HAN
Author Information
1. Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Korea. m91w95@dreamwiz.com
- Publication Type:Case Report
- Keywords:
ABO;
Polymerase chain reaction;
Allele;
A1(Leu);
O1v
- MeSH:
Alleles*;
Discrimination (Psychology);
DNA;
Forensic Medicine;
Gene Frequency;
Genotype;
Nucleotides;
Phenotype;
Polymerase Chain Reaction
- From:The Korean Journal of Laboratory Medicine
2006;26(5):374-379
- CountryRepublic of Korea
- Language:Korean
-
Abstract:
BACKGROUND: ABO genotyping is a useful tool in case of ABO discrepancies and in legal medicine. Recent knowledge of various alleles in the ABO gene has led to the need of a different method that can cover numerous polymorphisms. We performed a polymerase chain reaction using sequencespecific priming (PCR-SSP) with 12 primer sets and evaluated its value in the detection of 8 ABO alleles. METHODS: Genomic DNA was isolated from peripheral blood of 222 unrelated Koreans. Sequencespecific primer sets for the nucleotides 261, 297, 467, 802, 803, and 1059 were selected, and 12 PCR reactions were performed for each sample. Direct sequencing was performed to evaluate the accuracy of discrimination between A1(Pro) and A1(Leu) and between O1 and O1v. RESULTS: All the ABO genotype patterns were in an exact match with the ABO phenotypes. The results from sequencing and PCR-SSP were equivalent. The allele frequencies of A1, B, O1, and O1v were 27.25%, 19.82%, 27.25%, and 25.68% respectively. Out of total 121 A1 alleles, 6 (4.96%) were A1(Pro) alleles and 115 (95.04%) were A1(Leu) alleles. No A2, O2, or CisAB alleles were found in this study. CONCLUSIONS: The proportion of O1v allele was similar to that of O1 allele. This was an unexpected result. We developed a method for detecting 8 ABO alleles by PCR-SSP; the method was accurate and was able to discriminate between A1(Pro) and A1(Leu) and between O1 and O1v.
