A landscape of transcriptome analysis of three sclerotia growth stages in Polyporus umbellatus.
10.19540/j.cnki.cjcmm.20190701.112
- Author:
Xiao-Yu BIAN
1
;
Tian-Lin PEI
1
;
Zong-Suo LIANG
2
;
Zhao-Yang CHANG
1
Author Information
1. North West Agriculture and Forestry University,Academy of Life Science Yangling 712100,China.
2. North West Agriculture and Forestry University,Academy of Life Science Yangling 712100,China College of Life Sciences,Zhejiang Sci-Tech University Hangzhou 310000,China.
- Publication Type:Journal Article
- Keywords:
effective content;
growth;
sclerotia of Polyporus umbellatus;
transcriptome
- MeSH:
China;
Gene Expression Profiling;
Genes, Fungal;
Medicine, Chinese Traditional;
Polyporus;
genetics;
growth & development;
Transcriptome
- From:
China Journal of Chinese Materia Medica
2019;44(17):3718-3723
- CountryChina
- Language:Chinese
-
Abstract:
Polyporus umbellatus,a traditional Chinese precious medicine as long been used for eliminating dampness,diuresis and have effect on cancer,getting more and more popularly in China recently. And the developmental metabolic process of the medicinal fungus,P. umbellatus,has been gotten more attention. This study is for the first time to explore the three sclerotial growth stages in P. umbellatus,named " white Polyporus"( initial phase), " grey Polyporus"( developmental phase) and " black Polyporus"( mature phase),by utilizing the de novo transcriptome assembly analysis technology. Finally,we obtained 88. 12 Gb sequence containing85 235 unigenes( ≥200 bp) assembled and 100% were annotated. We identified genes differentially expressed among the three stages of the sclerotia and screened out MFSgst,ERG4/ERG24,WD40,Rho A,CYP450,PKS,GSase and CHS1,which may contribute to the production of medicinal secondary metabolites and the defense mechanism against the environmental stress and biological invasion. We did the qRT-PCR trial to verify our results,which is in line with expectations. Our results are purposed to unearth the molecular mechanism of the accumulation of active constituents in different stages of Polyporus sclerotia which can be applied in the production and protection of Polyporus effectively.
