Analysis of gene mutation in a pedigree with autosomal dominant Charcot-Marie-Tooth disease.
10.12122/j.issn.1673-4254.2019.01.10
- Author:
Li QIN
1
;
Canhong YANG
1
;
Tianming LÜ
1
;
Lanying LI
1
;
Dandan ZONG
1
;
Yueying WU
1
Author Information
1. Department of Neurology, Third Affiliated Hospital of Southern Medical University, Guangzhou 510630, China.
- Publication Type:Journal Article
- Keywords:
Charcot-Marie-Tooth disease 2K;
autosomal dominance;
ganglioside-induced differentiation-associated protein 1;
gene mutation
- MeSH:
Amino Acids;
Charcot-Marie-Tooth Disease;
genetics;
Female;
Genes, Dominant;
genetics;
Heterozygote;
High-Throughput Nucleotide Sequencing;
methods;
Humans;
Male;
Mutation, Missense;
Nerve Tissue Proteins;
genetics;
Pedigree;
Software
- From:
Journal of Southern Medical University
2019;39(1):63-68
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVE:To investigate the molecular genetic mechanism of Charcot- Marie-Tooth (CMT) disease in a pedigree.
METHODS:Genomic DNA was extracted from the peripheral blood of the family members of a pedigree with autosomal dominant CMT disease, and 65 candidate genes of the proband were screened using target exon capture and the next generation sequencing, and the suspicious genes were verified using Sanger sequencing. PolyPhen-2, PROVEAN and SIFT software were used to predict the function of the mutant genes, and PyMOL-1 software was used to simulate the mutant protein structure.
RESULTS:A heterozygous missense mutation [c.371A>G (p.Y124C)] was detected in exon 3 of gene of the proband. This heterozygous mutation was also detected in both the proband's mother and her brother, but not in her father. Multiple sequence alignment analysis showed that tyrosine at codon 124 of GDAP1 protein was highly conserved. All the 3 prediction software predicted that the mutation was harmful. Molecular structure simulation showed a weakened interaction force between the amino acid residues at codon 124 and the surrounding amino acid residues to affect the overall stability of the protein.
CONCLUSIONS:The mutation of gene may be related to the pathogenesis of autosomal dominant AD-CMT in this pedigree. The newly discovered c.371A>G mutation (p.Y124C) expands the mutation spectrum of gene, but further study is needed to clarify the underlying pathogenesis.
