Cultural Conditions for Mycelial Growth and Molecular Phylogenetic Relationship in Different Wild Strains of Schizophyllum commune.
- Author:
Nuhu ALAM
1
;
Youn Jeong CHA
;
Mi Ja SHIM
;
Tae Soo LEE
;
U Youn LEE
Author Information
1. Department of Biology, University of Incheon, Incheon 406-840, Korea. uylee@incheon.ac.kr
- Publication Type:Original Article
- Keywords:
ITS;
Mycelial growth;
Physicochemical;
RAPD;
rDNA;
Schizophyllum commune
- MeSH:
Agar;
Agaricales;
Calcium;
Calcium Compounds;
Carbon;
DNA;
DNA, Ribosomal;
Genetic Variation;
Glucose;
Glycine;
Histidine;
Hydrogen-Ion Concentration;
Lactose;
Nitrates;
Nitrogen;
Peptones;
Phosphates;
Polymerase Chain Reaction;
Potassium;
Potassium Compounds;
Quaternary Ammonium Compounds;
Random Amplified Polymorphic DNA Technique;
Schizophyllum;
Solanum tuberosum;
Sprains and Strains;
Yeasts
- From:Mycobiology
2010;38(1):17-25
- CountryRepublic of Korea
- Language:English
-
Abstract:
The common split-gilled mushroom, Schizophyllum commune is found throughout the world on woody plants. This study was initiated to evaluate conditions for favorable vegetative growth and to determine molecular phylogenetic relationship in twelve different strains of S. commune. A suitable temperature for mycelial growth was obtained at 30degrees C. This mushroom grew well in acidic conditions and pH 5 was the most favorable. Hamada, glucose peptone, Hennerberg, potato dextrose agar and yeast malt extract were favorable media for growing mycelia, while Lilly and glucose tryptone were unfavorable. Dextrin was the best and lactose was the less effective carbon source. The most suitable nitrogen sources were calcium nitrate, glycine, and potassium nitrate, whereas ammonium phosphate and histidine were the least effective for the mycelial growth of S. commune. The genetic diversity of each strain was investigated in order to identify them. The internal transcribed spacer (ITS) regions of rDNA were amplified using PCR. The size of the ITS1 and ITS2 regions of rDNA from the different strains varied from 129 to 143 bp and 241 to 243 bp, respectively. The sequence of ITS1 was more variable than that of ITS2, while the 5.8S sequences were identical. A phylogenetic tree of the ITS region sequences indicated that the selected strains were classified into three clusters. The reciprocal homologies of the ITS region sequences ranged from 99 to 100%. The strains were also analyzed by random amplification of polymorphic DNA (RAPD) with 20 arbitrary primers. Twelve primers efficiently amplified the genomic DNA. The number of amplified bands varied depending on the primers used or the strains tested. The average number of polymorphic bands observed per primer was 4.5. The size of polymorphic fragments was obtained in the range of 0.2 to 2.3 kb. These results indicate that the RAPD technique is well suited for detecting the genetic diversity in the S. commune strains tested.
