Analysis on the feasibility of genechip method in detecting Mycobacterium tuberculosis drug resistance
10.3969/j.issn.1673-4130.2015.23.024
- VernacularTitle:基因芯片法检测结核分枝杆菌耐药性的可行性分析
- Author:
Xiaohong HU
;
Qiyun XIANG
;
Qian ZHUANG
;
Mo LI
;
Yan′e DONG
;
- Publication Type:Journal Article
- Keywords:
genechip method;
proportion method for susceptibility testing;
DNA sequencing;
sensitivity;
specificity;
coincidence rate
- From:
International Journal of Laboratory Medicine
2015;(23):3421-3422,3425
- CountryChina
- Language:Chinese
-
Abstract:
Objective To analyse the sensitivity ,specificity and coincidence rate of genechip method in the detection of resistance to antibacterial agents in Mycobacterium tuberculosis(MTB) ,in order to provide a convenient ,accurate and rapid method for detec‐ting antibacterial resistance in MTB .Methods The DNA sequencing was taken as gold standard ,and antibacterial resistance of the strains of MTB isolated from sputum specimens of 250 cases of patients with tuberculosis from August to December 2014 were de‐tected by using the genechip method and proportion method for susceptibility testing at the same time .Efficacies of the two methods in detecting MTB resistance to rifarnpin and isoniazid were compared .Results The MTB resistance rate to rifarnpin detected by u‐sing the genechip method and proportion method for susceptibility testing was 3 .0% and 3 .5% respectively ;that to isoniazid was 6 .7% and 8 .2% respectively .For detecting M TB resistance to rifarnpin and isoniazid ,the DNA sequencing was taken as gold standard ,the sensitivity ,specificity and coincidence rate of genechip method was higher than those of proportion method for suscep‐tibility testing ,and the test time of genechip method was shorter than that of proportion method for susceptibility testing ,there were statistically significant differences(P<0 .05) .Conclusion Using the genechip method to detecting MTB resistance to rifampin and isoniazid has high sensitivity ,specificity and coincidence rate ,which could replace the proportion method for susceptibility tes‐ting and become an effective method .
