Study of Rhubarb anti-Yersina pestis based on DNA microarray
- VernacularTitle:大黄抑制鼠疫耶尔森菌的基因芯片检测
- Author:
Qun-hua, BAI
;
Yan, JIA
;
Xing-bi, DA
;
Hong, XIAO
;
Ying-xiong, WANG
;
Rui-fu, YANG
;
Jing-fu, QIU
- Publication Type:Journal Article
- Keywords:
Yersinia pesti;
Rhubarb;
Anti-bacterial agents;
Microchip analytical procedures
- From:Chinese Journal of Endemiology
2008;27(6):602-605
- CountryChina
- Language:Chinese
-
Abstract:
Objective To establish a method for studying molecular mechanism of Rhubarb inhibiting anti-Yersinia pesti based on DNA microarray.Methods A whole genome DN A microarray containing 4005 annotated genes of Yersiniapesti Was used.The minimal inhibitory concentration(MIC)of Rhubarb to Yersiniapestiwas determined by liquid dilution method.The gene expression profile of Yersinia pesti was performed after the exposure to Rhubarb at a concentration of 10×MIC for 30 minutes.The total RNA extracted and purified from Yersinia pesti Was reversely transfected to cDNA and labeled by Cy3-Cy5 dye.The labeled probes were hybridized to the microarray anti the results were obtained by a laser scanner and the microarray data was confirmed by real-time quantitative RT-PCR.Results The platform of the DNA microarray-based bacteria transcriptional profile was established.A total of 498 genes of Yersinia pesti changed significantly in response to Rhubarb.Among them.358 genes were up-regulated,140 down-reguated.Conclusions The whole genome DNA microarray can be used in the studying of molecular anti-Yersinia pesti mechanism of Rhubarb.
