Phylogenctics of Getah virus and its migration
10.3969/j.issn.1002-2694.2017.04.001
- VernacularTitle:盖塔病毒分子进化及其迁徙
- Author:
Yuanyuan LI
;
Hong LIU
;
Xiaolong LI
;
Shihong FU
;
Xiaoyan GAO
;
Wenwen LEI
;
Zhi LYU
;
Ying HE
;
Huanyu WANG
;
Guiqin WANG
;
Guodong LIANG
- Keywords:
Getah virus;
molecular evolution;
spatial and temporal migration
- From:
Chinese Journal of Zoonoses
2017;33(4):293-299
- CountryChina
- Language:Chinese
-
Abstract:
In order to investigate the molecular evolution and spatio-temporal migration of Getah viruses (GETV) isolated around the world,the nucleotide and deduced amino acid sequence of GETVs were analyzed and phylogenetic trees were constructed by using informatics software including ClustalX1.83,MegaAlign,GeneDOC and Mega6.0.The Bayesian Stochastic Search Variable Selection (BSSVS) program in the BEAST v 1.8.1 software package was used to analyze the spatial dynamics of the Getah virus.Results showed that the full-length of Getah virus E2 gene consists of 1 266 nueleotides,encoding 422 amino acids.And the homology of nucleotide and amino acid were 94.5％ 100％ and 96.4％ 100％ respectively.The molecular evolution analysis revealed that there were no species and geographical distribution difference existing among GETV host animals (e.g.horses and pigs) and vectors (e.g.mosquitoes).Bioinformatics analysis showed that GETV originated in Malaysia,then it was spread to Japan,China,South Korea,Mongolia,Russia,etc.GETV E2 gene was relatively stable since GETV was first isolated in 1955.The differences of species and geographical distribution did not exist among GETV host animals and vectors,and the virus has spread from tropical regions to Eurasian continent.Thus,strengthening the detection and monitoring of GETV and its infections in humans and livestock is critical.
