Expression profile of microRNAs and bioinformatics analysis in human gastric cancer tissues
10.13315/j.cnki.cjcep.2017.06.001
- VernacularTitle:胃癌组织microRNA表达谱检测及生物信息学分析
- Author:
Yousheng HUANG
;
Na JIE
;
Yixin ZHANG
;
Zhifei LUO
;
Fenggui XUE
- Keywords:
gastric neoplasms;
microRNA;
differential expression;
bioinformatics;
microRNA array
- From:
Chinese Journal of Clinical and Experimental Pathology
2017;33(6):591-595
- CountryChina
- Language:Chinese
-
Abstract:
This experiment was designed to investigate the expression profile of miRNAs (microRNA) in human gastric cancer tissues.Methods The expression profiles of miRNAs were compared between 3 pairs of GC and adjacent normal tissues using an Exiqon miRNA array,following which quantitative PCR (qPCR) was employed to confirm the results of the miRNA array,and 10 miRNAs were selected.Bioinformatics was used to analyze the biological function of the differentially expressed miRNAs and its target genes in gastric cancer.Results Compared with adjacent mucosal tissues,95 miRNAs were up-regulated and 16 miRNAs were down-regulated in GC (＞ 2 folds,P ＜ 0.05).The qPCR results were consistent with microarray-based expression analysis (P =0.049).Furthermore,the online GO and pathway analysis revealed that miRNAs might involve RNA transcription,RNA metabolism,gene expression,gene silencing,and other biological functions in GC.Conclusion There is abnormal expression of miRNAs in gastric cancer,and the abnormal expression of miRNAs may be related to GC tumorigenesis.
