Comparison of sequence between adenoviral DNA and Escherichia coli DNA
- VernacularTitle:2型、5型腺病毒DNA与12型腺病毒DNA、大肠杆菌DNA序列的对比研究
- Author:
Liangxi WANG
;
Guofu DING
;
Yongling LU
- Publication Type:Journal Article
- Keywords:
DNA, bacterial;
DNA, adenoviral;
CpG motif;
neutralizing CpG oligodeoxynucleotide;
computational biology
- From:
Medical Journal of Chinese People's Liberation Army
2001;0(11):-
- CountryChina
- Language:Chinese
-
Abstract:
Objective To identify the putative CpG-N ODNs in adenovisus 2 DNA (Adv2 DNA) and Adv5 DNA by comparing the sequence difference among Adv2, 5, 12 DNA and E.coli (EC) DNA. Methods Sequences of Adv2, 5, 12 DNA and EC DNA were obtained from the Entrez Nucleotides database at NCBI. The specific CpG motifs of Adv2 DNA and Adv5 DNA were identified after above sequences were analyzed and compared by softwares such as DNATools, BioEdit, and so on. All the 12-ODNs with specific CpG motif core were searched from Adv2 DNA and Adv5 DNA. Results 19 specific CpG motifs were ascertained and 504 12-ODNs were detected in Adv2 DNA and Adv5 DNA. Conclusion 504 12-ODNs were putative CpG-N ODNs in Adv2 DNA and Adv5 DNA.
