Study of ocular surface macro genome in dry eye patients
10.13389/j.cnki.rao.2017.0034
- VernacularTitle:干眼患者眼表宏基因组研究
- Author:
Hong CHEN
;
Xiaofeng WEN
;
Yuhua DENG
;
Lai WEI
;
Guanghua PENG
- Keywords:
dry eye;
ocular surface microbiota;
metagenomic shotgun sequencing;
antibiotic resistance genes
- From:
Recent Advances in Ophthalmology
2017;37(2):129-132
- CountryChina
- Language:Chinese
-
Abstract:
Objective To investigate the difference in ocular surface microbiota between dry eye patients and healthy subjects,and discuss the role of microbiota in dry eye.Methods Twenty cases of dry eye patients and 90 cases of healthy subjects were collected in the PLA General Hospital and Zhongshan Ophthalmic Center.The samples of conjunctiva impression cytology were collected from all subjects,and then metagenomic shotgun sequencing was performed following the DNA extraction.The differences in alpha diversity and metabolic pathways of the ocular surface microbiota between dry eye patients and healthy subjects were evaluated.Results There was no significant difference in alpha diversity of the microbial community between dry eye patients and healthy subjects (P =0.13).However,an increase of 15 species and a decrease of 10 species were detected on the ocular surface of dry eye patients.The enriched antibiotic resistance genes in dry eye patients were more than healthy subjects.Conclusion Although the alpha diversity of the microbial community on ocular surface between dry eye patients and healthy subjects are not distinguishable,a significant difference could be found in relative abundance and metabolic pathways,suggest that these specific microbiome may be related to the pathogenesis and disease progression of dry eye.
