Karyotypes analyses in 632 autism spectrum disorder trios
10.3969/j.issn.1002-0152.2016.03.005
- VernacularTitle:孤独症谱系障碍核心家系染色体核型分析研究
- Author:
Tianlan LU
;
Zhiliu WU
;
Yanyan RUAN
;
Ang MEIXIJIA
;
Weihua YUE
;
Jun LI
;
Lifang WANG
;
Dai ZHANG
- Publication Type:Journal Article
- Keywords:
Autism;
Karyotyping;
Chromosomal aberrations
- From:
Chinese Journal of Nervous and Mental Diseases
2016;42(3):150-155
- CountryChina
- Language:Chinese
-
Abstract:
Objective To detect chromosomal aberrations of autism spectrum disorder (ASD), we performed karyo?types analyses in 632 ASD trios and then investigated whether copy number variants and neurodevelopment related genes are present in the regions of chromosomal aberrations. Methods Karyotypes analyses were performed in 632 ASD trios (1896 individuals). In addition, we investigated whether there were pathogenic copy number variants located in the rele?vant regions of detected aberrant karyotypes by using the database of the International Standards for Cytogenomic Arrays (ISCA) and the Genomic Variation and Phenotype in Humans using Ensembl Resources (DECIPHER) for ASD patients. Results We detected aberrant results in 22 of 632 patients (3.48%) by karyotypes analyses. Of these 22 aberrant karyo?types, 5 were de novo (0.79%), including the duplication, the translocation, karyotypes of Turner syndrome and the addi?tional material with unknown origin. Seventeen children affected with autism had aberrant karyotypes inherited from one of their parents. By using the ISCA and the DECIPHER database, we found that several copy number variants with high pathogenicity were located in 1q25 and 3p24. Further, these copy number variants consisted of several genes related to neurodevelopment such as TNR, ASTN1, and NMNAT2. Conclusion There are a few de novo chromosomal aberrations in some patients affected with ASD. Copy number variants of several pathogenic neurodevelopmental related genes may exist in the regions of chromosomal aberrations. Karyotypes analyses may be applied to explore the genetic etiology in some patients affected with ASD.
