Polymorphism research of HLA-A, B, DRB1 high resolution alleles and haplotypes in population from Heilongjiang
10.3969/j.issn.1000-484X.2016.01.018
- VernacularTitle:黑龙江地区人群 HLA－A、B、DRB1高分辨等位基因及单体型多态性研究
- Author:
Xin LI
;
Juan DING
;
Xin WANG
;
Ling HOU
;
Ying LIU
;
Jie LIU
- Publication Type:Journal Article
- Keywords:
HLA-A/B/DRB1;
High resolution genotyping;
Gene/Haplotype frequency
- From:
Chinese Journal of Immunology
2016;(1):83-89
- CountryChina
- Language:Chinese
-
Abstract:
Objective:To research the distribution features of HLA-A,B and DRB1 high resolution alleles and haplotypes in Heilongjiang population.Methods:PCR-SBT methods was applied for HLA-A,B,DRB1 high resolution genotyping of 13 670 unrelated and healthy donors in region of Heilongjiang,and haplotype frequencies were calculated by counting and maximum likelihood method. Results:A total of 286 HLA alleles were observed and the most frequent alleles(>0.1)were A*02∶01,A*24∶02,A*11∶01,DR*07∶01,DR*09∶01 and DR*15∶01.Among 1 087 kinds of HLA-A-B haplotype ,there were 22 kinds frequency higher than 0.01,and 267 kinds with statistically significant and positive linkage disequilibrium(ALD>0,HF≥1.09×10-4,χ2>3.84).Moreover,among 1 329 kinds of HLA-B-DRB1 haplotype,there were 19 haplotypes frequency higher than 0.01,and 357 kinds with statistically significant and positive linkage disequilibrium.1 348 kinds of A-B-DR Haplotype were informative with frequency≥1.66 ×10-4 in 4 428 haplotypes, and a total of 17 kinds of A-B-DR haplotype frequency higher than 0.005.Conclusion: Get the distribution features of HLA high resolution allele and haplotype in Heilongjiang population, and associated genetic parameters, Distribution of alleles and haplotypes close to northern Han population,but have their own distribution.
