Study of DNA methylated Gene in acute ST segment elevation myocardial infarction
10.3760/cma.j.issn.1671-0282.2015.12.027
- VernacularTitle:急性ST段抬高型心肌梗死甲基化谱的研究
- Author:
Peiyi LIN
;
Junrong MO
;
Haifeng MAO
;
Huilin JIANG
;
Xiaohui CHEN
- Publication Type:Journal Article
- Keywords:
ST segment elevation myocardial infarction;
Methylation microarray;
Gene Ontology analyze;
Pathway analyze
- From:
Chinese Journal of Emergency Medicine
2015;24(12):1449-1454
- CountryChina
- Language:Chinese
-
Abstract:
Objective To investigate the regulatory networks of DNA methylation profiles in STEMI by methylation microarrays.Methods A total often male patients with STEMI and ten male healthy controls were recruited.Methyl-DNA immunoprecipitation and Nimblegen HG18 Meth 385K promoter plus CpG island microarrays were used to identify differentially methylated regions.And several bioinformatics analysis tools which included chromosomal assignment, gene ontology analysis and pathway analysis with SignalMap and The Database for Annotation, Visualization and Integrated Discovery were used to high-throughput analysis.Results Compared with healthy controls, DMRs of STEMI is 1 634, There are 1 480 (90.57％), 131 (8.02％) and23 (1.41％) methylated sites were separately located on High CpG-containing promoter, Intermediate CpG-containing promoter and Low CpG-containing promoter;Gene Ontology and Pathway analysis expressed DNA methylated genes of signaling pathway in MI identified glycerophespholipid metabolism, cysteine and methionine metabolism, Dilated cardiomyopathy, Arrhythmogenic right ventricular cardiomyopathy, regulation of actin cyteskeleton, calcium signaling pathway.However, the signal pathway about lipid metabolism is shown no significant difference.Conclusions Bioinformatics tools could provide the quick and high-throughput analysis of data from methylation microarray and enable the function classification of differentially expressed genes of STEMI.
