Progress in algorithms of microorganism detection based on high throughput sequencing data
10.7644/j.issn.1674-9960.2015.01.017
- VernacularTitle:基于高通量测序数据的微生物检测算法研究进展
- Author:
Jiangyu LI
;
Xiaolei WANG
;
Yiqing MAO
;
Dongsheng ZHAO
- Publication Type:Journal Article
- Keywords:
high throughput sequencing;
microorganism detection;
bioinformatics;
algorithms
- From:
Military Medical Sciences
2015;(1):71-74
- CountryChina
- Language:Chinese
-
Abstract:
The development of high throughput sequencing technology has promoted the development of many related spheres of research .Many research institutions are studying algorithms of microorganism detection using high throughput se -quencing data .Some algorithms have already been designed and published .In this paper , we investigated the literature re-garding the use of high throughput sequencing data for microorganism detection , studied the function and workflow of four released algorithms of microorganism detection based on high throughput sequencing data , and analyzed their advantages and disadvantages.Finally, we summarized how these detection algorithms were designed and classified them before we proposed ways of improvement .
