Wild-type measles viruses isolated in Ningbo, China, 2004-2013
10.3969/cjz.j.issn.1002-2694.2014.08.013
- VernacularTitle:宁波市2004-2013年麻疹野病毒分离株的 RT-PCR 检测与分析
- Author:
Wenzhen GU
;
Yan FU
;
Shu ZHANG
;
Fengjiao HU
;
Xingqiang PAN
;
Guozhang XU
- Publication Type:Journal Article
- Keywords:
measles virus;
genotype;
sequence analysis
- From:
Chinese Journal of Zoonoses
2014;(8):840-842
- CountryChina
- Language:Chinese
-
Abstract:
In this study ,we analyzed the genetic characterizations and propagation paths of measles viruses prevalent in Ningbo ,China from 2004 to 2013 .Measles viruses were isolated from throat swab specimens from 2004 to 2013 ,and 450 bp fragments of C terminus of nucleoprotein (N) gene were amplified by RT-PCR .Sequence analysis was conducted of all 31 virus strains ,and then compared with other measles virus strains published in GenBank .Results showed that all the 31 measles virus isolates belonged to genotype H1 ,6 strains (one strains in 2004 and 5 ones in 2005) belonged to H1b subtype ,and others be-longed to H1a subtype .Compared the 31 strains to the China 93-4 and China 94-7 ,the homology of 450 bp fragments of C ter-minus of nucleoprotein (N) gene were 97 .1%-100% and 96 .7%-100% ,respectively .The homology of 450 bp fragments of nu-cleotide and nucleotide (amino acids) compared with S191 were 81 .9%-92 .4% and 87 .2%-90 .6% ,respectively .It’s suggested that genotype H1 measles virus circulated in Ningbo from 2004 to 2013 ,and H1a was the predominant epidemic strain ,and H1b strain was existed as well .There are five different transmission chains of H1a subtype caused measles co-circulations in Ning-bo .
