Sequence analysis on mt COXI fragment of Taenia cestodes from 6 regions of Yunnan province
10.3969/j.issn.1002-2694.2009.12.017
- VernacularTitle:云南6地域带绦虫mtCOXⅠ片段序列测定分析
- Author:
Hui ZHANG
;
Shungao MA
;
Guoliang ZHONG
;
Yimei YANG
- Publication Type:Journal Article
- Keywords:
Taenia cestodes;
identification;
mtCOXⅠ;
sequencing
- From:
Chinese Journal of Zoonoses
2009;(12):1199-1201
- CountryChina
- Language:Chinese
-
Abstract:
To identify Taenia cestodes from 6 regions of Yunnan province by PCR and sequencing of mtCOXⅠfragment. the genomic DNA of Taenia cestodes was extracted from proglottid collected in 6 region of Yunnan province, and mtCOXⅠ gene fragments were amplified by PCR, and then sequenced. The genomic distance and phylogenetic tree were constructed in comparison with other known mtCOXⅠgene sequences of T.solium , T.saginata and T. asiatica in GenBank using DNA MAN software. Through distance matrix,it was found that the homologie of NJ4, NJ1 and DQ2 was 99.8%, DL4 and NJ3 homologie was 99.5%, NJ2 and DQ3 homologie was 98.8%; the homologie of DL3 and BZ3 was 98.3%, while the homologie was 96.0% with BZ2; The phylogenetic tree demonstrated that 10 Taenia cestodes including NJ1-4, DL2-3and DQ1-3 occupied one brance with BZ3. BN1, CX1, LC1 and BZ2 occupied one brance, then two brance occupied and occupied with other one which was occupied by DL1 and BZ1. Taenia cestodes from Nujiang and Diqing were T. asiatica. Taenia cestodes from XiShangbanna,Lincang and Chuxiong were T.saginata.Taenia cestodes from Dali were T.solium or T.asiatica.Because same species have no difference from different regions. mtCOXⅠfragment sequencing is valid for tapeworms identification.
