Association between haplotype of interleukin-22 gene promoter and susceptibility to pulmonary tuberculosis
10.3760/cma.j.issn.1674-2397.2013.01.004
- VernacularTitle:白细胞介素-22基因启动子区单倍体型与肺结核易感性的关联分析
- Author:
Yuxin WEN
;
Guoliang ZHANG
;
Xinchun CHEN
;
Mingxia ZHANG
;
Lin YANG
;
Zheng WANG
- Publication Type:Journal Article
- Keywords:
Interleukin-22;
Polymorphism,single nucleotide;
Haplotype;
Tuberculosis,pulmonary;
Disease susceptibility
- From:Chinese Journal of Clinical Infectious Diseases
2013;(1):18-22
- CountryChina
- Language:Chinese
-
Abstract:
Objective To investigte the association between haplotype of the promoter of interleukin-22 (IL-22) gene and the susceptibility to pulmonary tuberculosis.Methods Clinical data of 479 patients with pulmonary tuberculosis was collected from Shenzhen Third People's Hospital during January 2009 and December 2010,and 358 healthy controls were also enrolled in the study.Single nucleotide polymorphisms (SNPs) of IL-22 (rs2227472,rs2227473,rs2227478,rs2227483,rs2227485,rs2227486,rs2227487 and rs2227513) were genotyped using the Sequenom MassARRAY iPLEX Platform.The allele frequency and odds ratio (OR) of genotypes of SNPs and haplotypes of IL-22 were calculated; the association between the haplotypes of IL-22 and the susceptibility to pulmonary tuberculosis was analysis.Results rs2227472,rs2227473,rs2227478,rs2227483 and rs2227485 were associated with the susceptibility to tuberculosis (OR =0.796,0.653,0.769,0.762 and 0.816 ; x2 =4.594,6.921,5.256,5.089 and 3.827 ; P ＜0.05 or P ＜ 0.01).The frequencies of haplotypes (CTFAA and TATGG) in case group were significantly different from those in control group (CTFAA:0.004 vs.O.032,OR =0.04,x2 =384.623,P＜0.01; TATGG:0.522 vs.0.460,OR=1.49,x2 =6.690,P=0.01).Conclusions Five SNPs of IL-22 (rs2227472,rs2227473,rs2227478,rs2227483,rs2227485) and 2 haplotypes (CTTAA and TATGG) are associated with the susceptibility to pulmonary tuberculosis.Haplotype CTTAA is a protective factor for susceptibility to pulmonary tuberculosis,whereas haplotype TATGG is a risk factor.
