Single nucleotide polymorphism associated with Chinese sporadic amyotrophic lateral sclerosis patient
10.3760/cma.j.issn.1006-7876.2010.06.015
- VernacularTitle:散发性肌萎缩侧索硬化单核苷酸多态位点质谱分型及疾病易患性关联分析
- Author:
Xiaoguang LI
;
Yicong LIN
;
Manqing XIE
;
Jianghu ZHANG
;
Mingsheng LIU
;
Benhong LI
;
Yanhuan ZHAO
;
Haitao REN
;
Liying CUI
- Publication Type:Journal Article
- Keywords:
Amyotrophic lateral sclerosis;
Polymorphism,single nucleotide;
Spectrometry,mass,matrix-assisted laser desorption-ionization;
Disease susceptibility
- From:
Chinese Journal of Neurology
2010;43(6):427-431
- CountryChina
- Language:Chinese
-
Abstract:
Objective Amyotrophic lateral sclerosis(ALS)is a progressive paralytic disorder resulting from the degeneration of upper and lower motor neurons.Sporadic ALS(SALS)accounm for majority of patients.ALS is a kind of complex disorder.There were several single nucleotide polymorphism (SNP)reported to be associated with SALS in recently published genome-wide association(GWA)study,but there are few data from Asia ALS population and no report focus on SNP which may associated with SALS of Chinese origin.Our study is to screen and add the SNPs related to the risks of SALs in Chinese.Methods Eighty-six individuals with SALS and 94 matched controls were recruited for our study and genomic DNA from blood samples was extracted.Genotypes were determined by a matrix assisted laser desorption/ionization time of flisht mass spectrometry based approach followed by association analysis. Results Individual genotype data for 8 SNPs,rs6700125,rs10260404, rs1942239,rs2279812,rs2405657,rs558889,rs6922711 and rs935 1470 in Chinese population showed no significant association with sporadic ALS.Combining genotype data from published GWA,rs1942239 gained in strength of allelic association(P value decreased to 9.07×10-5 from 1.48×10-4),and rs558889 deviated Hardy-Weinberg equilibrium at ALS case group which may be associated with susceptibility.Conclusions SNP rs1942239 and rs558889 may contribute to susceptibility of sporadic ALS in Chinese patient.The larger sample studies are warranted to confirm the association.
