Sequence polymorphisms of the mitochondrial DNA HVR I and HVR II regions in the Deng populations from Tibet in China.
- Author:
Longli KANG
1
;
Xiaofeng ZHANG
;
Kai LIU
;
Jianmin ZHAO
Author Information
- Publication Type:Journal Article
- MeSH: Asian Continental Ancestry Group; ethnology; genetics; Base Sequence; China; Complementarity Determining Regions; DNA, Mitochondrial; genetics; Female; Humans; Male; Molecular Sequence Data; Pedigree; Polymorphism, Genetic; Tibet
- From: Chinese Journal of Medical Genetics 2009;26(6):690-695
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo analyze the sequence polymorphisms of the mitochondrial DNA hypervariable regions I (HVR I) and HVR II in the Deng population in Linzhi area of Tibet.
METHODSmtDNAs obtained from 119 unrelated individuals were amplified and directly sequenced.
RESULTSOne hundred and ten variable sites were identified, including nucleotide transitions, transversions, and insertions. In the HVR I region (nt16024-nt16365), 68 polymorphic sites and 119 haplotypes were observed, the genetic diversity was 0.9916. In the HVR II (nt73-nt340) region, 42 polymorphic sites and 113 haplotypes were observed, and the genetic diversity was 0.9907. The random match probability of the HVR I and HVR II regions were 0.0084 and 0.0093, respectively. When combining the HVR I and HVR II regions, 119 different haplotypes were found. The combined match probability of two unrelated persons having the same sequence was 0.0084.
CONCLUSIONThere are some unique polymorphic loci in the Deng population. There are different genetic structures between Chinese and other Asian populations in the mitochondrial DNA D-loop region. Sequence polymorphism of mitochondrial DNA HVR I and HVR II can be used as a genetic marker for forensic individual identification and genetic analysis.
