Researches on influence of squalene synthase gene polymorphism on catalytic efficiency of its encode enzyme in Glycyrrhiza uralensis.
- Author:
Ying LIU
1
;
Ning ZHANG
;
Xue-Yong WANG
;
Chun-Sheng LIU
;
Hong-Hao CHEN
;
Hao WEN
Author Information
- Publication Type:Journal Article
- MeSH: Amino Acid Substitution; Biocatalysis; Cloning, Molecular; DNA, Complementary; chemistry; genetics; Electrophoresis, Polyacrylamide Gel; Escherichia coli; genetics; Farnesyl-Diphosphate Farnesyltransferase; genetics; metabolism; Gas Chromatography-Mass Spectrometry; Glycyrrhiza uralensis; enzymology; genetics; INDEL Mutation; Isoenzymes; genetics; metabolism; Molecular Sequence Data; Plant Proteins; genetics; metabolism; Polymorphism, Genetic; Polymorphism, Single Nucleotide; Recombinant Proteins; metabolism; Sequence Analysis, DNA; Squalene; metabolism
- From: China Journal of Chinese Materia Medica 2012;37(24):3777-3783
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo analyse the polymorphism of squalene synthase gene and reveal the influence of squalene synthase (SQS) gene polymorphism on the catalytic efficiency of its encode enzyme in Glycyrrhiza uralensi.
METHODThe total RNA was extracted. PCR was used to amplify the coding sequences of squalene synthase gene, which were sequenced and analysed. The expression vectors containing different SQS gene sequences, including SQS1C, SQS1F, SQS2A, SQS2B, were constructed and transformed into Escherichia coli BL21. The fusion protein was induced to express by IPTG, then was isolated, purified and used to carry out the enzymatic reaction in vitro. GC-MS was used to analyse the production.
RESULTThere were three kinds of gene polymorphism existing in SQS1 gene of G. uralensis, including single nucleotide polymorphism (SNPs), insertion/deletion length polymorphism (InDels) and level of amino acid, the proportion of conservative replace of SQS1 was 53.94%, and there were 2 mutational sites in structural domains. The proportion of conservative replace of SQS2 was 60%, and there was 1 mutational site in structural domains. The production squalene could be detected by GC-MS in all the 4 kinds of enzymatic reactions. The capacity of accumulating squalene of SQS1F was higher than other SQS genes.
CONCLUSIONThe polymorphism of SQS gene was quite abundant in G. uralensis, which maybe the molecular foundation of the formation of high-quality liquorice.