Construction of nervous system relative protein and gene secondary database.
- Author:
Pan WANG
1
;
Xinhao CHEN
;
Xiangming LIU
Author Information
1. College of Electronics and Information Engineering, South-Central University for Nationalities, Wuhan 430074, China. wangpan@scuec.edu.cn
- Publication Type:Journal Article
- MeSH:
Database Management Systems;
Databases, Nucleic Acid;
Databases, Protein;
Gene Expression Profiling;
Humans;
Nervous System;
Proteins;
chemistry
- From:
Journal of Biomedical Engineering
2007;24(5):1023-1026
- CountryChina
- Language:Chinese
-
Abstract:
Along with the rapid research of neural molecular biology, abundant data are produced so that the collection and coordination of high-throughout data about nervous system relative proteins and genes are imperative. Through analyzing the biological primary databases maintained by NCBI and RCSB as the main data source and designing a new data model, a local specialized secondary database is constructed, which mainly includes nucleotide sequences, protein sequences and protein structures, and is established on Sun Blade 2000 System and Oracle 9i. All programs are developed by Java technology. A method of web information automatic retrieval with XML is proposed for sequence data collection and submission to the database. JSP + JavaBean technology is used to support data promulgation on Internet. The establishment of this database provides an excellent platform for the research of neural molecular biology and the pathogenesis of related diseases.
