Association between H-ras and L-myc gene polymorphisms and susceptibility to colorectal cancer.
- Author:
Qin NI
1
;
Yong-jing ZHANG
;
Shan-chun ZHANG
;
Ming-juan JIN
;
Xin-yuan MA
;
Kai-yan YAO
;
Qi-long LI
;
Kun CHEN
Author Information
- Publication Type:Journal Article
- MeSH: Aged; Colonic Neoplasms; genetics; Colorectal Neoplasms; genetics; Female; Genes, myc; Genes, ras; Genetic Predisposition to Disease; Genotype; Humans; Logistic Models; Male; Middle Aged; Multifactor Dimensionality Reduction; Polymerase Chain Reaction; methods; Polymorphism, Restriction Fragment Length; Polymorphism, Single Nucleotide; Rectal Neoplasms; genetics; Risk; Surveys and Questionnaires
- From: Chinese Journal of Oncology 2012;34(1):15-20
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo explore the association between the polymorphisms of oncogenes H-ras and L-myc and colorectal cancer risk, and the interaction of those genes.
METHODSThe genotypes of H-ras and L-myc genes were determined by polymerase chain reaction-based restriction fragment length polymorphism analysis. Stratified analysis and logistic model were used to detect the gene-gene interaction. The gene-gene interaction was validated by multifactor dimensionality reduction (MDR) analysis.
RESULTSThe single SNP model showed that the polymorphisms of H-ras and L-myc genes were not significantly related with colorectal cancer risk (P > 0.05). Stratified analysis revealed that among the L-myc LS + SS genotype carriers, those with H-ras TC + CC genotype showed significantly increased risk of rectal cancer than those with TT genotype (OR = 1.81, P = 0.005). The positive interaction between L-myc and H-ras was detected by logistic regression model. The OR of the interaction effect was 2.74 (P = 0.024). This result was confirmed in the MDR model, with 54.83% testing balanced accuracy and 10/10 cross-validation consistency, and the model was still significant after the 1000 times permutation test (P = 0.001).
CONCLUSIONOur findings suggest that the polymorphism of H-ras and L-myc genes is not related to colorectal cancer risk, but there is a synergy between H-ras and L-myc polymorphisms in the development of rectal cancer.