Study on population genetic variation of Dendrobium nobile in Yunnan by DALP.
- Author:
Ming-Yu ZHANG
1
;
Hong YU
1
;
Feng YUAN
1
Author Information
1. Yunnan Herbal Laboratory, Institute of Herb Biotic Resources, Yunnan University, Kunming 650091, China.
- Publication Type:Journal Article
- MeSH:
Amplified Fragment Length Polymorphism Analysis;
methods;
China;
Dendrobium;
classification;
genetics;
Genetic Variation;
Phylogeny;
Polymorphism, Genetic
- From:
China Journal of Chinese Materia Medica
2013;38(22):3866-3870
- CountryChina
- Language:Chinese
-
Abstract:
The Direct Amplification of Length Polymorphisms was applied to assess genetic diversity and structure of 7 populations of Dendrobium nobile, comparing one population of D. lituflorum. The five primer combinations were amplified to produce 140 clear bands, and 102 polymorphic bands had been detected with each pair of primer producing 20.4 polymorphic bands on average. At species level, the percentage of polymorphic bands (PPB) was 72.86%, the Nei's gene diversity index (H) was 0.288 9, and the Shannon's information index (I) was 0.424 2. At population level, the average PPB was 47.96%, H was 0.1861, and I was 0.273 9 in 7 populations. The coefficient of gene differentiation (Gst) was 0.338 6 among populations of D. nobile. It showed that 33.86% of the total genetic diversity was attributable to genetic differentiation among populations, while the rest 66.14% was resided between individuals within population.
