Comparison of two nucleic acid extraction methods for norovirus in oysters.
- Author:
Qiao YUAN
1
;
Hui LI
;
Xiaoling DENG
;
Yanling MO
;
Ling FANG
;
Changwen KE
Author Information
- Publication Type:Journal Article
- MeSH: Animals; Centrifugation; methods; Norovirus; genetics; isolation & purification; Ostreidae; virology; RNA, Viral; isolation & purification
- From: Journal of Southern Medical University 2013;33(4):568-572
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo explore a convenient and effective method for norovirus nucleic acid extraction from oysters suitable for long-term viral surveillance.
METHODSTwo methods, namely method A (glycine washing and polyethylene glycol precipitation of the virus followed by silica gel centrifugal column) and method B (protease K digestion followed by application of paramagnetic silicon) were compared for their performance in norovirus nucleic acid extraction from oysters. Real-time RT-PCR was used to detect norovirus in naturally infected oysters and in oysters with induced infection.
RESULTSThe two methods yielded comparable positive detection rates for the samples, but the recovery rate of the virus was higher with method B than with method A.
CONCLUSIONMethod B is a more convenient and rapid method for norovirus nucleic acid extraction from oysters and suitable for long-term surveillance of norovirus.