Ribosomal DNA ITS sequences analysis of the Chinese crude drug fructus schisandrae sphenantherae and fruts of Schisandra viridis.
- Author:
Jian-ping GAO
1
;
Yan-han WANG
;
Chun-feng QIAO
;
Dao-feng CHEN
Author Information
- Publication Type:Journal Article
- MeSH: Base Sequence; DNA, Plant; genetics; DNA, Ribosomal Spacer; genetics; Drug Contamination; Fruit; genetics; Molecular Sequence Data; Phylogeny; Plants, Medicinal; classification; genetics; RNA, Ribosomal, 5.8S; genetics; Schisandra; classification; genetics; Sequence Analysis, DNA
- From: China Journal of Chinese Materia Medica 2003;28(8):706-710
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo find the patterns of the rDNA ITS sequence variation of Schisandra sphenanthera and S. viridis, and to establish the molecular biological method for the identification of Fructus Schisandrae Sphenantherae and the fruits of S. viridis.
METHODPCR products were sequenced directly and the sequences were analyzed with PAUP 4.0b10. NJ systematic tree was obtained with neighbor-joining method.
RESULTThe Complete ITS sequence of S. sphenanthera was 691-692 bp, of which there were 282 bp of ITS1 and 246-247 bp of ITS2. The complete sequence of S. viridis was 694-695 bp, consisting of 285-286 bp of ITS1 and 246-247 bp of ITS2. There were three informative sites in ITS1 regions for the two species. In the NJ tree with Kadsura anamosma and K. coccinea as outgroups, five different populations of S. viridis were the monophyletic group with the bootstrap value of 68%. These populations included one from Tianmushan, Zhejiang province, three populations from Jigongshan, Henan Province and the other two populations of S. viridis cited the sequences from GeneBank (registration numbers are AF263438 and AF163703 respectively).
CONCLUSIONThe rDNA internal transcribed spacer is a good marker to distinguish the Fructus Schisandrae Sphenantherae from the fruits of S. viridis.
