Preparation and identification of hammerhead ribozyme in vitro against caspase-12 mRNA fragments.
- Author:
Shan JIANG
1
;
Qing XIE
;
Wei ZHANG
;
Xia-Qiu ZHOU
;
Hong YU
;
You-Xin JIN
Author Information
- Publication Type:Journal Article
- MeSH: Animals; Base Sequence; Caspase 12; genetics; Endoplasmic Reticulum; metabolism; Mice; Mice, Inbred BALB C; Molecular Sequence Data; Oxidative Stress; genetics; RNA, Catalytic; chemistry; genetics; RNA, Messenger; genetics
- From: Chinese Journal of Hepatology 2005;13(2):121-124
- CountryChina
- Language:Chinese
-
Abstract:
OBJECTIVETo design and synthesize ribozymes targeting 138 and 218 sites of the mRNA nucleotide of mouse caspase-12, a key intermedium of ER stress mediated apoptosis, and to identify their activities through in vitro transcription and cleavage.
METHODSThe mouse caspase-12 gene fragment was obtained by RT-PCR and cloned into the PGEM-T vector under the control of T7 RNA polymerase promoter. The transcription product of the target was labeled with a-32P UTP, while ribozymes were not labeled. Ribozyme and target RNA were incubated for 90 min at 37 degree C in a reaction buffer to perform the cleavage reaction.
RESULTSIt was found that under a condition of 37 degree C, pH 7.5 and with Mg2+ in a concentration of 10 mmol/L, Rz138 and Rz218 both cleaved targets at predicted sites, and the cleavage efficiency of Rz138 was 100%.
CONCLUSIONRz138 and Rz218 prepared in vitro possess the perfect specific catalytic cleavage activity. Rz138 has excellent cleavage efficiency. It may be a promising tool to prevent ER stress induced apoptosis through catalytic cleavage of caspase-12 mRNA in vivo. It also can be used to verify whether caspase-12 is necessary in ER stress induced apoptosis.