HapAnalyzer: Minimum Haplotype Analysis System for Association Studies.
- Author:
Ho Youl JUNG
1
;
Jung Sun PARK
;
Yun Ju PARK
;
Young Jin KIM
;
Kuchan KIMM
;
In Song KOH
Author Information
1. Division of Epidemiology and Bioinformatics, National Genome Research Institute, National Institute of Health, 5 Nokbun-dong, Eunpyeng-gu, Seoul, 122-701, Korea. insong@nih.go.kr
- Publication Type:Note
- Keywords:
SNP;
haplotype;
haplotype block;
disease association
- MeSH:
Case-Control Studies;
Haplotypes*;
Linkage Disequilibrium
- From:Genomics & Informatics
2004;2(2):107-109
- CountryRepublic of Korea
- Language:English
-
Abstract:
SUMMARY: HapAnalyzer is an analysis system that provides minimum analysis methods for the SNP-based association studies. It consists of Hardy-Weinberg equilibrium (HWE) test, linkage disequilibrium (LD) computation, haplotype reconstruction, and SNP (or haplotype)-phenotype association assessment. It is well suited to a case-control association study for the unrelated population.
