Detection of Astrovirus Infection from Hospitalized Young Children Feces by Reverse Transcription - Polymerase Chain Reaction.
- Author:
Hae Kyung PARK
;
So Youn WOO
;
Ju Young SEOH
;
Young Hae CHONG
;
Jeong Wan SEO
- Publication Type:Original Article
- Keywords:
Astrovirus;
RT-PCR;
EIA;
Rotavirus
- MeSH:
Cell Culture Techniques;
Child*;
Coinfection;
Conserved Sequence;
Diarrhea;
Feces*;
Genome;
Humans;
Incidence;
Inpatients;
Korea;
Length of Stay;
Mamastrovirus;
Polymerase Chain Reaction*;
Reverse Transcription*;
Rotavirus;
Seasons
- From:Journal of the Korean Society for Microbiology
1999;34(5):453-459
- CountryRepublic of Korea
- Language:Korean
-
Abstract:
Astrovirus is frequently associated with diarrhea in children. It can not be readily isolated by cell culture, and an electronmicroscope is usually used for detection of this agent. Recently in 1995 a combined method of reverse transcription-polymerase chain reaction (RT-PCR) was designed for easier detection of astrovirus, which is based on the conserved sequence in 3'-end of genomes of the 7 known serotypes of human astrovirus. As of yet there has not been any report of astrovirus data in Korea using the RT-PCR methods. The purpose of this study was to detect astrovirus incidence, severity of symptoms, seasonal variation and coinfection rate with rotavirus in Korean children inpatients with diarrhea. Fecal specimens from 61 young children hospitalized with gasteroenteritis Korea from Jan. 1996 through Mar. 1997. They were examined for astroviurs infection by RT-PCR method. Results are as follows: 1. Astrovirus was detected at 9.8% (6/61) from fecal specimens of children with severe diarrhea by EIA using monoclonal antibody coated plates. 2. Astorvirus was detected at 29.5% (18/61) from fecal specimens of children with severe diarrhea by RT-PCR. 3. The age of the 18 children affected by astrovirus ranged from 2 monthes to 7 years with mean of 3.0 years. 4. Mean hospital stay of the 1S children was 6.1 days. 5. Five (27.8%) astrovirus RT-PCR positive strains were confirmed in November and in December, respectively out of 18 specimens in total. 6. Astrovirus coinfection with rotavirus type G1 was confirmed in 15/16 specimens (93.8%), and with type G2 was in 1/16 specimens (6.3%).
