Differential expression analysis of plasma circRNA in patients with type 2 diabetes mellitus
10.3969/j.issn.1006-6187.2024.01.005
- VernacularTitle:2型糖尿病患者血浆环状RNA差异性表达的研究
- Author:
Huijing ZHU
1
;
Mingming YANG
;
Dan ZHOU
;
Yuguang LIU
Author Information
1. 274031 菏泽市立医院内分泌科
- Keywords:
Diabetes mellitus,type 2;
circRNA;
High-throughput gene microarray sequencing;
Bioinformatics analysis
- From:
Chinese Journal of Diabetes
2024;32(1):16-22
- CountryChina
- Language:Chinese
-
Abstract:
Objective To examine the differential expression of plasma circRNA in individuals with type 2 diabetes mellitus(T2DM)and to elucidate the potential role of circRNA in the pathogenesis and progression of T2DM.Methods A total of 33 newly diagnosed T2DM patients who were hospitalized in the Department of Endocrinology of Heze Municipal Hospital and 33 healthy subjects with normal glucose tolerance(NC)were enrolled in this study from March 2022 to March 2023.Three subjects with T2DM and 3 with NC were randomly selected from study population and underwent high-throughput sequencing to identify differentially expressed circRNA.Six circRNA with significant differences were selected,and validated in the remaining study population using Real-Time Quantitative Polymerase Chain Reaction(RT-qPCR).Bioinformatics analyses were conducted on the differentially expressed circRNA-associated genes,and their interaction with microRNA(miRNA)was predicted.Results Microarray analysis revealed 166 significantly differentially expressed circRNA(FC≥2,P<0.05)in the T2DM group compared with NC group.Among them,137 were up-regulated and 29 were down-regulated.RT-qPCR validation of six circRNA showed that the expression level of hsa_circ_0000705 was significantly higher,while the expression levels of hsa_circ_0005362 and hsa_circ_0042839 were significantly lower in T2DM group,consistent with the microarray results.However,hsa_circ_0117392,hsa_circ_0008311,and hsa_circ_0087641 showed no significant changes.Conclusion Differentially expressed circRNA are present in T2DM patients.Hsa_circ_0005362 was significantly down-regulated and may be involved in the development of T2DM through the regulation of related signaling pathways by targeting miR-128-1-5p.
