1.Accuracy of Quick Sequential Organ Failure Assessment (qSOFA) scoring as in-hospital mortality predictor in adult patients with sepsis secondary to urinary tract infection admitted in a local tertiary hospital in Davao City: A cross-sectional study
Angela Libby Y. Tan ; Jose Paolo P. Panuda
Philippine Journal of Internal Medicine 2024;62(2):93-99
Background:
The quick Sequential Organ Failure Assessment (qSOFA) score was introduced by Sepsis-3 or the Third International Consensus Definitions for Sepsis and Septic Shock to help physicians in identifying patients outside the intensive
care unit with suspected infection who are at high risk for in-hospital mortality. However, sepsis is not a homogenous entity
and the outcomes vary based on several factors. This study aimed to determine the predictive accuracy of qSOFA in identifying those at high-risk of in-hospital mortality among adult patients with sepsis secondary to urinary tract infection.
Methodology:
A retrospective cohort study was done involving the use of qSOFA score to predict in-hospital mortality of
adult patients with a diagnosis of sepsis secondary to urinary tract infection, admitted in the hospital from January 1, 2013
to December 31, 2020. qSOFA is computed based on the following independent variables: systolic blood pressure (SBP),
respiratory rate (RR), and Glasgow Coma Scale (GCS).
Results:
Of the 128 charts retrieved, 121 patients were included in the study. Fifteen (12.40%) died while 106 (87.60%)
survived. Mean age was 60.76 years old, with more females (71.90%) than males (28.10%). Hypertension and Diabetes
Mellitus Type 2 were the most frequent comorbidities. Complicated UTI was the most frequent source of infection. Mean
length of stay was 8.29 days. Forty (33.06%) patients had qSOFA ≥ 2 wherein 11 (27.5%) died. Diagnostic performance
results revealed: sensitivity (73.33%), specificity (72.64%), positive (27.5%) and negative (95.06%) predictive values, and
positive (2.68) and negative (0.37) likelihood ratios. qSOFA accuracy was 72.73% with an AUROC of 0.76.
Conclusion
Among the admitted adult patients with sepsis secondary to a UTI, qSOFA had a good prognostic accuracy
for in-hospital mortality.
Sepsis
;
Urinary Tract Infections
;
Hospital Mortality
2.Evaluation of the lower urinary tract function using voiding spot assay in mice.
Chuang LUO ; Jia-Li YANG ; Juan LIU ; Xiang QIU ; Xiang XIE ; Huan CHEN
Acta Physiologica Sinica 2023;75(5):636-646
The objective of present study was to develop a simple and reliable voiding spot assay (VSA) system to evaluate the lower urinary tract function of mice, and to establish it as a standardized protocol. Ultraviolet (UV) light was used to screen out the filter paper without autofluorescence and with optimal urine diffusion properties. Next, the appropriate wavelength of UV was determined based on the quality of the photographic image of urine spots on the filter paper. To confirm that the urine stain area on the filter paper was correlated with the amount of urine, a volume-area standard curve was constructed. The utility of this VSA system was validated using female wild-type C57BL/6J mice aged 12-13 weeks, and the data generated under identical procedural settings were compared among laboratories. Furthermore, this VSA system was employed to analyze the changes in voiding patterns in mice with urinary tract infections or transportation stress. No. 4 filter paper with a thickness of 0.7 mm was identified as the most suitable material for VSA, exhibiting no autofluorescence and facilitating optimal urine diffusion. The filter paper retained its integrity during the assay, and there was a linear correlation between urine volume and stained area under 365 nm UV light. Utilizing this VSA system, we determined that female wild-type C57BL/6J mice produced approximately 695.8 μL total urine and 5.5 primary voiding spots (PVS) with an average size of 126.4 μL/spot within 4-h period. Over 84% of PVS volumes ranged from 20 to 200 μL. Notably, PVS volumes of mice were similar across different laboratories. Mice with urinary tract infections or transportation stress exhibited significant changes in VSA parameters, including increased voiding frequency, PVS number, and decreased PVS volume. Therefore, this VSA system can be used to evaluate the urinary function of normal mice, as well as those with urinary tract infection or transportation stress.
Mice
;
Female
;
Animals
;
Urodynamics
;
Mice, Inbred C57BL
;
Urination
;
Urinary Bladder
;
Urinary Tract Infections
3.Effects of ppk1 deletion on the drug susceptibility of uropathogenic Escherichia coli producing ESBLs.
Jing Yi OU ; Wan Shan CHEN ; Mei Jun CHEN ; Ling Zhai ZHAO ; Ling Hua LI ; Liang PENG ; Lan LIANG ; Ya Ling SHI
Chinese Journal of Preventive Medicine 2023;57(8):1238-1245
To investigate the effect and the mechanism of ppk1 gene deletion on the drug susceptibility of uropathogenic Escherichia coli producing extended-spectrum beta-lactamases (ESBLs-UPEC). The study was an experimental study. From March to April 2021, a strain of ESBLs-UPEC (genotype was TEM combined with CTX-M-14) named as UE210113, was isolated from urine sample of the patient with urinary tract infection in the Laboratory Department of Guangzhou Eighth People's Hospital, meanwhile its ppk1 gene knock-out strain Δpk1 and complemented strain Δpk1-C were constructed by suicide plasmid homologous recombination technique, which was used to study the effect of ppk1 gene on ESBLs-UPEC drug sensitivity and its mechanism. The drug susceptibility of UE210113, Δpk1, and Δpk1-C were measured by Vitek2 Compact System and broth microdilution method. The quantitative expression of ESBLs, outer membrane protein and multidrug efflux systems encoding genes of UE210113, Δpk1 and Δpk1-C were performed by using qRT-PCR analysis. By using two independent sample Mann-Whitney U test, the drug susceptibility results showed that, compared with UE210113 strain, the sensitivities of Δpk1 to ceftazidime, cefepime, tobramycin, minocycline and cotrimoxazole were enhanced (Z=-2.121,P<0.05;Z=-2.236,P<0.05;Z=-2.236,P<0.05;Z=-2.121,P<0.05), and the drug susceptibility of Δpk1-C restored to the same as which of UE210113 (Z=0,P>0.05). The expression levels of ESBLs-enconding genes blaTEM and blaCTX-M-14 in Δpk1 were significantly down-regulated compared with UE210113, but the expression was not restored in Δpk1-C. The expression of outer membrane protein gene omp F in Δpk1 was significantly up-regulated, while the expression of omp A and omp C were down-regulated. The results showed that the expression of multidrug efflux systems encoding genes tol C, mdt A and mdtG were down-regulated in Δpk1 compared with UE210113. The expression of all of the outer membrane protein genes and the multidrug efflux systems genes were restored in Δpk1-C. In conclusion,the lost of ppk1 gene can affect the expression of the outer membrane protein and multidrug efflux systems encoding genes of ESBLs-UPEC, which increase the sensitivity of ESBLs-UPEC to various drugs.
Humans
;
beta-Lactamases/metabolism*
;
Uropathogenic Escherichia coli/metabolism*
;
Urinary Tract Infections
;
Plasmids
;
Membrane Proteins/genetics*
;
Escherichia coli Infections
;
Microbial Sensitivity Tests
;
Anti-Bacterial Agents/pharmacology*
4.Effects of ppk1 deletion on the drug susceptibility of uropathogenic Escherichia coli producing ESBLs.
Jing Yi OU ; Wan Shan CHEN ; Mei Jun CHEN ; Ling Zhai ZHAO ; Ling Hua LI ; Liang PENG ; Lan LIANG ; Ya Ling SHI
Chinese Journal of Preventive Medicine 2023;57(8):1238-1245
To investigate the effect and the mechanism of ppk1 gene deletion on the drug susceptibility of uropathogenic Escherichia coli producing extended-spectrum beta-lactamases (ESBLs-UPEC). The study was an experimental study. From March to April 2021, a strain of ESBLs-UPEC (genotype was TEM combined with CTX-M-14) named as UE210113, was isolated from urine sample of the patient with urinary tract infection in the Laboratory Department of Guangzhou Eighth People's Hospital, meanwhile its ppk1 gene knock-out strain Δpk1 and complemented strain Δpk1-C were constructed by suicide plasmid homologous recombination technique, which was used to study the effect of ppk1 gene on ESBLs-UPEC drug sensitivity and its mechanism. The drug susceptibility of UE210113, Δpk1, and Δpk1-C were measured by Vitek2 Compact System and broth microdilution method. The quantitative expression of ESBLs, outer membrane protein and multidrug efflux systems encoding genes of UE210113, Δpk1 and Δpk1-C were performed by using qRT-PCR analysis. By using two independent sample Mann-Whitney U test, the drug susceptibility results showed that, compared with UE210113 strain, the sensitivities of Δpk1 to ceftazidime, cefepime, tobramycin, minocycline and cotrimoxazole were enhanced (Z=-2.121,P<0.05;Z=-2.236,P<0.05;Z=-2.236,P<0.05;Z=-2.121,P<0.05), and the drug susceptibility of Δpk1-C restored to the same as which of UE210113 (Z=0,P>0.05). The expression levels of ESBLs-enconding genes blaTEM and blaCTX-M-14 in Δpk1 were significantly down-regulated compared with UE210113, but the expression was not restored in Δpk1-C. The expression of outer membrane protein gene omp F in Δpk1 was significantly up-regulated, while the expression of omp A and omp C were down-regulated. The results showed that the expression of multidrug efflux systems encoding genes tol C, mdt A and mdtG were down-regulated in Δpk1 compared with UE210113. The expression of all of the outer membrane protein genes and the multidrug efflux systems genes were restored in Δpk1-C. In conclusion,the lost of ppk1 gene can affect the expression of the outer membrane protein and multidrug efflux systems encoding genes of ESBLs-UPEC, which increase the sensitivity of ESBLs-UPEC to various drugs.
Humans
;
beta-Lactamases/metabolism*
;
Uropathogenic Escherichia coli/metabolism*
;
Urinary Tract Infections
;
Plasmids
;
Membrane Proteins/genetics*
;
Escherichia coli Infections
;
Microbial Sensitivity Tests
;
Anti-Bacterial Agents/pharmacology*
5.External validation of a clinical prediction rule on the need for radiologic imaging to identify urological disorders in adult patients with febrile urinary tract infections.
Ken-Ichiro KOBAYASHI ; Korei YAMASHITA ; Shinsuke MIZUNO ; Kenji KUBO ; Nobuhiro KOMIYA ; Satoko OTSU
Singapore medical journal 2022;63(3):167-169
6.Related factors of urinary tract infections in inpatients based on real world data.
Chun Hong BIAN ; Yue PAN ; Ya Nan TAN ; Li Min ZHANG ; Rong Qi WANG ; Guo Jun ZHANG
Chinese Journal of Preventive Medicine 2022;56(11):1636-1641
To analyze the risk factors for urinary tract infection (UTI) among inpatients. The case data of 1 875 inpatients receiving urinary bacterial culture in Beijing Haidian Hospital from October 2019 to May 2021 were analyzed retrospectively. According to the etiological diagnostic criteria of UTI, they were divided into infection group and non-infection group. The species and distribution of pathogens in the infection group were analyzed, and the case data and laboratory indexes were subjected to univariate analysis. The variables with statistical significance were selected for binary logistic regression to analyze the risk factors of urinary tract infection and establish a prediction model. The receiver operating characteristic (ROC) curve was drawn for each parameter included in the model, and the area under the curve (AUC) was calculated. The diagnostic and predictive efficacy of each parameter alone and their combination for UTI were evaluated. So, a total of 1 162 patients with non-infection group and 713 patients with UTI were detected. Among the cultured pathogens, the constituent ratio of Gram-negative bacteria, Gram-positive bacteria and fungi was 57.2%(408/713), 35.9%(256/713) and 6.9%(49/713) respectively. Multivariate analysis showed that, Age, duration of urinary catheterization>7 d, stroke and orthopedic surgery were the risk factors of UTI among inpatients. The use of antibiotics is a protective factor for urinary tract infections. The prediction model of UTI was established by the risk factors, age, duration of urinary catheterization>7 d, stroke, orthopedic surgery, urinary leukocyte esterase, urinary nitrite and Coefficient of variability of red blood cell volume distribution width (RDW-CV). The AUC of the combination of the eight parameters in diagnosing and predicting UTI was 0.835 (95%CI: 0.816-0.855), with the sensitivity of 70.7% and the specificity of 82.8%. In conclusion,the combination of the eight parameters can better assist in the diagnosis and prediction of UTI, and provide an experimental basis for clinicians to judge UTI.
Humans
;
Retrospective Studies
;
Inpatients
;
Urinary Tract Infections/microbiology*
;
Urinalysis
;
Stroke
8.Biofilm formation and antibiotic resistance of urinary catheter associated bacteria from hospitalized patients, Bangladesh
Malaysian Journal of Microbiology 2021;17(6):635-645
Aims:
Biofilm formation of bacteria inside the surface of urinary catheters triggers severe urinary tract infections (UTIs). This study aims to determine the biofilm forming capacity of bacteria isolated from urinary catheters of patients diagnosed with UTIs as well as comparison of antibiotic sensitivity patterns between biofilm and non-biofilm forming isolates.
Methodology and results:
A total of 40 urinary catheters were collected from 96 h catheterized patients. The isolated uropathogenic bacteria were identified and examined for biofilm formation using the microtiter plate method. Later, the isolates were subjected to antimicrobial susceptibility towards 12 antibiotics that commonly used for treating UTIs using the disk diffusion method. All the catheters were found colonized with two to five different bacterial species individually. Out of the 131 isolates from 40 catheters, Pseudomonas aeruginosa (38/131, 29%) was the predominant isolated bacteria followed by Escherichia coli (31/131, 24%), Proteus vulgaris (24/131, 18%), Klebsiella pneumoniae (21/131, 16%) and Staphylococcus aureus (17/131, 13%). Among these, the highest biofilm forming capacity was observed in P. aeruginosa (26%), followed by P. vulgaris (16%) and K. pneumoniae (13%). Regarding antibiotic resistance, biofilm forming bacteria showed resistance to multiple drugs except for carbapenems. Moreover, biofilm formers exhibited higher resistance than non-biofilm formers against antibiotics such as trimethoprim/sulfamethoxazole (100% vs 82%), amoxicillin-clavulanic acid (81% vs 55%), cefixime (85% vs 55%), ceftriaxone (81% vs 45%), cefalexin (93% vs 55%), amikacin (70% vs 45%), ampicillin (89% vs 73%), ciprofloxacin (70% vs. 36%) and ceftriaxone (81 vs 45%), (p-value<0.05).
Conclusion, significance and impact of study
Most of the isolated uropathogenic bacteria from catheters were biofilm formers and multiple antibiotic resistant. Appropriate selection of antibiotics, meticulous hygiene practices in hospital settings and limiting the duration of catheterization can reduce biofilm formation and the emergence of antibiotic resistance.
Biofilms
;
Urinary Catheters
;
Urinary Tract Infections
9.Risk factors for urinary tract infection in kidney transplantation from brain death donor and its role in graft function.
Qianqian YE ; Lielin WU ; Bisong ZHU ; Gang ZHANG ; Bo YANG ; Peng JIN ; Xiangrong ZHU ; Jinliang XIE ; Xiang DING
Journal of Central South University(Medical Sciences) 2021;46(11):1220-1226
OBJECTIVES:
Urinary tract infection (UTI) is the most common infection complication after kidney transplantation, and the reports of the incidence vary greatly among different centers. This study aims to explore the risk factors for UTI after kidney transplantation with the donation from brain death (DBD) and the impact on graft function, thus to provide theoretical basis for comprehensive prevention and treatment of UTI after kidney transplantation.
METHODS:
The clinical and laboratory data of DBD kidney transplantation from January 2017 to December 2018 in Xiangya Hospital, Central South University were collected and retrospectively analyzed. Patients were assigned into an UTI group and a non-UTI group. The base line characteristics, post-transplant complications, and graft function were compared between the 2 groups. Multivariate logistic regression was used to analyze the risk factors for UTI.
RESULTS:
A total of 212 DBD kidney transplant recipients were enrolled in this study. UTI occurred in 44 (20.75%) patients after transplantation. The female, the time of indwelling catheter, and postoperative urinary fistula were independent risk factors for UTI after DBD kidney transplantation. A total of 19 strains of gram-positive bacteria, 12 strains of gram-negative bacteria , and 10 strains of fungi were isolated from the urine of 44 UTI patients. The UTI after kidney transplantation significantly increased time of hospital stay (
CONCLUSIONS
UTI after DBD kidney transplantation transplantation affects the renal function at 3 months and increases the patient's economic burden.
Brain Death
;
Female
;
Humans
;
Kidney Transplantation/adverse effects*
;
Retrospective Studies
;
Risk Factors
;
Urinary Tract Infections/etiology*
10.Clinical features of neurogenic bladder with vesicoureteral reflux in children.
Meng SHEN ; Xin-Yue PAN ; Jie-Qiu ZHUANG ; De-Xuan WANG ; Hui CAI
Chinese Journal of Contemporary Pediatrics 2021;23(3):279-282
OBJECTIVE:
To study the clinical features of vesicoureteral reflux (VUR) in children with neurogenic bladder (NB), and to provide a reference for its early diagnosis and treatment.
METHODS:
Clinical data were collected from 26 children with NB and urinary tract infection who were admitted to the Department of Pediatric Nephrology from January 2014 to December 2019. According to the presence or absence of VUR, the children were divided into a VUR group with 11 children and a non-VUR group with 15 children. Clinical features were compared between the two groups.
RESULTS:
Compared with the non-VUR group, the VUR group had a significantly higher proportion of children with non-
CONCLUSIONS
When NB children have the clinical manifestations of non-
Child
;
Creatinine
;
Humans
;
Infant
;
Radionuclide Imaging
;
Urinary Bladder, Neurogenic/etiology*
;
Urinary Tract Infections/etiology*
;
Vesico-Ureteral Reflux/diagnostic imaging*


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